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OPENSEQ.org
L25 - L34
UniProt: Q5SHZ1 - P80340
Length: 255
Sequences: 1046
Seq/Len: 4.53
I_Prob: 0.51
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dZ7 3v2fZ7Contact Map
2j002j01Z7 2j03Z7Contact Map
4juw4juxZ7Contact Map
4kix4kixV2 4kizV2 4kj1V2 4kj3V2Contact Map
4kj54kj5V2 4kj7V2 4kj9V2 4kjbV2Contact Map
2zjr2zjrS2Contact Map
4btc4btdZ7Contact Map
3uyd3uyeV7 3uygV7Contact Map
3v223v23Z7 3v25Z7Contact Map
4gd13r8sV2 3r8tV2Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
46_K 31_L 1.32 0.51
74_V 5_W 1.07 0.30
139_V 24_T 0.98 0.22
77_D 14_K 0.93 0.19
155_L 37_K 0.88 0.16
50_Q 5_W 0.87 0.15
170_T 24_T 0.86 0.15
171_I 33_R 0.82 0.12
23_K 29_K 0.81 0.12
115_G 25_P 0.81 0.12
142_S 5_W 0.78 0.11
63_D 16_H 0.75 0.09
55_H 5_W 0.75 0.09
83_P 9_R 0.74 0.09
36_K 37_K 0.74 0.09
47_V 10_R 0.73 0.09
101_P 41_R 0.73 0.08
87_D 7_P 0.73 0.08
173_A 1_M 0.72 0.08
131_R 29_K 0.71 0.08
15_P 5_W 0.68 0.07
36_K 30_V 0.66 0.06
121_H 31_L 0.65 0.06
156_K 40_W 0.65 0.06
28_M 43_T 0.64 0.06
141_V 24_T 0.63 0.05
114_G 33_R 0.61 0.05
126_V 43_T 0.61 0.05
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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