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OPENSEQ.org
L36 - S18
UniProt: Q5SHR2 - Q5SLQ0
Length: 125
Sequences: 615
Seq/Len: 5.86
I_Prob: 0.36
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cR 3v2d9 3v2eR 3v2f9Contact Map
2j002j00R 2j019 2j02R 2j039Contact Map
3knh3knhR 3kni9 3knjR 3knk9Contact Map
3v223v22R 3v239 3v24R 3v259Contact Map
2y102y10R 2y119 2y18R 2y199Contact Map
3zn73zn7R 3zn99 3zndR 3zne9Contact Map
3v263v26R 3v279 3v28R 3v299Contact Map
2y142y14R 2y159 2y16R 2y179Contact Map
3huw3huwR 3hux9 3huyR 3huz9Contact Map
2y0u2y0uR 2y0v9 2y0wR 2y0x9Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
29_N 53_R 1.23 0.36
31_K 51_L 1.17 0.31
31_K 52_P 1.05 0.23
17_I 50_I 1.05 0.23
4_R 51_L 1.05 0.23
29_N 54_R 1.03 0.21
35_R 56_T 1.01 0.20
21_G 47_T 0.99 0.18
16_V 36_N 0.98 0.18
34_Q 70_I 0.89 0.13
24_Y 30_D 0.88 0.13
22_R 17_S 0.88 0.13
31_K 61_K 0.88 0.13
18_R 72_R 0.88 0.13
10_I 22_V 0.87 0.12
31_K 75_I 0.85 0.12
9_R 84_K 0.85 0.11
22_R 51_L 0.85 0.11
3_V 56_T 0.83 0.11
23_V 37_V 0.83 0.10
31_K 42_R 0.82 0.10
30_P 82_T 0.78 0.09
26_I 57_G 0.78 0.09
17_I 42_R 0.77 0.08
35_R 82_T 0.74 0.07
4_R 61_K 0.73 0.07
24_Y 76_L 0.73 0.07
10_I 64_R 0.70 0.06
22_R 19_K 0.70 0.06
29_N 47_T 0.70 0.06
9_R 32_R 0.69 0.06
13_K 18_R 0.69 0.06
9_R 23_K 0.68 0.06
33_K 20_A 0.67 0.05
9_R 31_L 0.67 0.05
10_I 30_D 0.66 0.05
26_I 30_D 0.66 0.05
16_V 56_T 0.66 0.05
16_V 51_L 0.65 0.05
37_G 69_T 0.65 0.05
18_R 65_I 0.64 0.04
33_K 67_A 0.62 0.04
20_H 26_L 0.61 0.04
25_V 78_L 0.61 0.04
13_K 24_A 0.60 0.04
18_R 50_I 0.59 0.04
9_R 18_R 0.59 0.04
17_I 34_Y 0.59 0.04
8_K 82_T 0.59 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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