OPENSEQ.org
L36 - S15
UniProt: Q5SHR2 - Q5SJ76
Length: 126
Sequences: 910
Seq/Len: 7.22
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cO 3v2d9 3v2eO 3v2f9Contact Map
2j002j00O 2j019 2j02O 2j039Contact Map
4juw4juwO 4jux9Contact Map
4kix4kix4 4kiyO 4kiz4 4kj0O 4kj14 4kj2O 4kj34 4kj4OContact Map
4kj54kj54 4kj6O 4kj74 4kj8O 4kj94 4kjaO 4kjb4 4kjcOContact Map
4gd13r8s4 3r8t4 4gd1O 4gd2OContact Map
3knh3knhO 3kni9 3knjO 3knk9Contact Map
3v223v22O 3v239 3v24O 3v259Contact Map
3ofo3ofoO 3ofpO 3ofq4 3ofr4Contact Map
2y102y10O 2y119 2y18O 2y199Contact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
10_I 60_V 0.95 0.01
12_D 43_L 0.89 0.01
31_K 51_H 0.88 0.01
20_H 72_R 0.86 0.01
29_N 61_G 0.86 0.01
21_G 30_A 0.75 0.01
4_R 45_V 0.74 0.01
22_R 46_H 0.74 0.01
22_R 43_L 0.73 0.01
35_R 65_R 0.69 0.01
9_R 79_R 0.69 0.01
11_C 27_V 0.68 0.01
29_N 5_K 0.67 0.01
30_P 59_M 0.66 0.01
18_R 57_L 0.66 0.01
1_M 43_L 0.64 0.01
28_E 62_Q 0.64 0.01
21_G 36_I 0.64 0.01
18_R 75_P 0.64 0.01
24_Y 60_V 0.63 0.01
21_G 21_D 0.63 0.01
7_V 55_G 0.62 0.01
9_R 5_K 0.61 0.01
20_H 26_E 0.60 0.01
27_C 27_V 0.59 0.01
20_H 5_K 0.59 0.01
16_V 73_E 0.59 0.01
10_I 43_L 0.59 0.01
32_H 55_G 0.59 0.01
20_H 68_R 0.58 0.01
32_H 51_H 0.57 0.01
13_K 47_K 0.57 0.01
32_H 27_V 0.57 0.01
17_I 72_R 0.57 0.01
20_H 73_E 0.57 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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