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OPENSEQ.org
L36 - S08
UniProt: Q5SHR2 - Q5SHQ2
Length: 175
Sequences: 930
Seq/Len: 5.50
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cH 3v2d9 3v2eH 3v2f9Contact Map
2j002j00H 2j019 2j02H 2j039Contact Map
4juw4juwH 4jux9Contact Map
4kix4kix4 4kiyH 4kiz4 4kj0H 4kj14 4kj2H 4kj34 4kj4HContact Map
4kj54kj54 4kj6H 4kj74 4kj8H 4kj94 4kjaH 4kjb4 4kjcHContact Map
4gd13r8s4 3r8t4 4gd1H 4gd2HContact Map
3knh3knhH 3kni9 3knjH 3knk9Contact Map
3v223v22H 3v239 3v24H 3v259Contact Map
3ofo3ofoH 3ofpH 3ofq4 3ofr4Contact Map
2y102y10H 2y119 2y18H 2y199Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
29_N 38_I 0.94 0.01
30_P 129_V 0.88 0.01
4_R 99_E 0.88 0.01
21_G 90_G 0.87 0.01
9_R 46_K 0.80 0.01
18_R 34_E 0.79 0.01
5_A 115_S 0.76 0.01
17_I 88_K 0.76 0.01
17_I 19_V 0.75 0.01
32_H 93_V 0.74 0.01
30_P 27_P 0.73 0.01
16_V 120_T 0.72 0.01
4_R 98_K 0.71 0.01
31_K 81_H 0.71 0.01
31_K 20_Y 0.71 0.01
35_R 95_V 0.71 0.01
3_V 9_M 0.70 0.01
20_H 20_Y 0.69 0.01
21_G 7_A 0.68 0.01
30_P 99_E 0.68 0.01
24_Y 137_V 0.67 0.01
29_N 102_R 0.67 0.01
3_V 32_K 0.66 0.01
12_D 21_K 0.66 0.01
12_D 127_L 0.66 0.01
35_R 63_L 0.66 0.01
9_R 134_I 0.66 0.01
35_R 128_G 0.66 0.01
35_R 25_D 0.66 0.01
31_K 44_F 0.65 0.01
22_R 104_R 0.64 0.01
18_R 35_I 0.64 0.01
10_I 112_L 0.63 0.01
16_V 41_R 0.63 0.01
5_A 135_C 0.62 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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