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OPENSEQ.org
L36 - S12
UniProt: Q5SHR2 - Q5SHN3
Length: 169
Sequences: 479
Seq/Len: 2.96
I_Prob: 0.84
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cL 3v2d9 3v2eL 3v2f9Contact Map
2j002j00L 2j019 2j02L 2j039Contact Map
4juw4juwL 4jux9Contact Map
4kix4kix4 4kiyL 4kiz4 4kj0L 4kj14 4kj2L 4kj34 4kj4LContact Map
4kj54kj54 4kj6L 4kj74 4kj8L 4kj94 4kjaL 4kjb4 4kjcLContact Map
4gd13r8s4 3r8t4 4gd1L 4gd2LContact Map
3knh3knhL 3kni9 3knjL 3knk9Contact Map
3v223v22L 3v239 3v24L 3v259Contact Map
3ofo3ofoL 3ofpL 3ofq4 3ofr4Contact Map
2y102y10L 2y119 2y18L 2y199Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
5_A 112_K 1.60 0.84
16_V 30_R 1.29 0.62
12_D 68_P 1.21 0.54
27_C 64_T 1.16 0.48
4_R 119_T 1.13 0.45
29_N 2_P 1.10 0.42
18_R 65_A 1.08 0.40
29_N 68_P 1.08 0.40
3_V 63_V 1.06 0.39
31_K 65_A 1.06 0.38
20_H 26_G 1.04 0.36
5_A 113_S 1.01 0.33
18_R 20_K 0.98 0.30
31_K 101_V 0.96 0.29
31_K 98_V 0.95 0.27
20_H 21_V 0.94 0.27
29_N 80_V 0.93 0.25
35_R 16_R 0.92 0.25
13_K 61_Y 0.92 0.24
16_V 39_T 0.91 0.24
11_C 64_T 0.89 0.22
25_V 16_R 0.87 0.20
15_K 30_R 0.85 0.19
4_R 105_A 0.85 0.19
28_E 13_E 0.84 0.18
28_E 14_K 0.83 0.17
4_R 79_V 0.82 0.17
37_G 38_R 0.81 0.16
26_I 79_V 0.80 0.16
21_G 80_V 0.80 0.15
13_K 59_S 0.79 0.15
4_R 108_K 0.79 0.14
27_C 5_N 0.79 0.14
15_K 11_G 0.77 0.14
22_R 65_A 0.76 0.13
32_H 49_L 0.76 0.13
12_D 20_K 0.76 0.13
23_V 112_K 0.75 0.13
31_K 30_R 0.75 0.12
18_R 102_Y 0.75 0.12
16_V 119_T 0.74 0.12
2_K 54_K 0.72 0.11
13_K 120_K 0.72 0.11
21_G 94_R 0.71 0.10
10_I 52_V 0.71 0.10
33_K 58_T 0.70 0.10
16_V 11_G 0.70 0.10
30_P 125_A 0.69 0.10
16_V 59_S 0.69 0.10
17_I 41_T 0.69 0.09
37_G 78_S 0.68 0.09
24_Y 70_E 0.67 0.09
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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