OPENSEQ.org
L36 - S20
UniProt: Q5SHR2 - P80380
Length: 143
Sequences: 872
Seq/Len: 7.09
I_Prob: 0.05
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cT 3v2d9 3v2eT 3v2f9Contact Map
2j002j00T 2j019 2j02T 2j039Contact Map
4juw4juwT 4jux9Contact Map
4kix4kix4 4kiyT 4kiz4 4kj0T 4kj14 4kj2T 4kj34 4kj4TContact Map
4kj54kj54 4kj6T 4kj74 4kj8T 4kj94 4kjaT 4kjb4 4kjcTContact Map
4gd13r8s4 3r8t4 4gd1T 4gd2TContact Map
3knh3knhT 3kni9 3knjT 3knk9Contact Map
3v223v22T 3v239 3v24T 3v259Contact Map
3ofo3ofoT 3ofpT 3ofq4 3ofr4Contact Map
2y102y10T 2y119 2y18T 2y199Contact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
21_G 59_A 1.03 0.05
8_K 82_S 0.90 0.03
31_K 11_S 0.88 0.03
4_R 24_L 0.88 0.03
31_K 12_A 0.87 0.03
31_K 29_K 0.86 0.03
20_H 22_R 0.86 0.03
34_Q 69_G 0.84 0.03
30_P 83_R 0.83 0.03
35_R 53_L 0.78 0.02
4_R 49_A 0.77 0.02
15_K 21_K 0.75 0.02
31_K 76_A 0.72 0.02
29_N 85_M 0.70 0.02
35_R 76_A 0.68 0.01
22_R 39_K 0.66 0.01
35_R 32_A 0.66 0.01
25_V 65_K 0.65 0.01
32_H 13_L 0.64 0.01
28_E 53_L 0.64 0.01
4_R 12_A 0.64 0.01
18_R 67_A 0.62 0.01
28_E 33_I 0.60 0.01
11_C 30_K 0.60 0.01
17_I 58_K 0.60 0.01
23_V 35_T 0.60 0.01
31_K 33_I 0.59 0.01
13_K 87_K 0.59 0.01
16_V 54_K 0.58 0.01
20_H 66_A 0.57 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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