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OPENSEQ.org
L15 - L17
UniProt: Q5SHQ7 - Q9Z9H5
Length: 268
Sequences: 1385
Seq/Len: 5.31
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dPR 3v2fPRContact Map
2j002j01PR 2j03PRContact Map
4juw4juxPRContact Map
4kix4kixLN 4kizLN 4kj1LN 4kj3LNContact Map
4kj54kj5LN 4kj7LN 4kj9LN 4kjbLNContact Map
2zjr2zjrIKContact Map
4btc4btdPRContact Map
3uyd3uyeO0 3uygO0Contact Map
4gd13r8sLN 3r8tLNContact Map
3ohc3ohjPR 3ohkPRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
122_P 82_E 0.88 0.01
24_G 27_S 0.86 0.00
137_K 76_V 0.79 0.00
129_A 23_N 0.76 0.00
19_V 31_H 0.73 0.00
3_L 54_L 0.72 0.00
60_M 108_G 0.71 0.00
56_S 10_L 0.70 0.00
84_N 95_T 0.70 0.00
106_L 116_L 0.69 0.00
40_S 38_V 0.67 0.00
85_L 114_V 0.66 0.00
138_L 84_A 0.65 0.00
35_H 13_H 0.64 0.00
14_K 116_L 0.64 0.00
60_M 55_A 0.63 0.00
95_V 95_T 0.63 0.00
49_R 26_K 0.61 0.00
136_E 89_D 0.61 0.00
43_G 3_H 0.61 0.00
5_D 13_H 0.61 0.00
133_S 103_R 0.61 0.00
3_L 50_H 0.61 0.00
102_R 70_L 0.61 0.00
31_A 117_V 0.60 0.00
58_T 6_S 0.59 0.00
38_Q 87_Y 0.59 0.00
5_D 33_R 0.59 0.00
29_K 78_K 0.59 0.00
105_L 52_I 0.58 0.00
92_E 20_L 0.58 0.00
97_P 108_G 0.58 0.00
83_V 39_P 0.58 0.00
39_K 100_L 0.58 0.00
122_P 116_L 0.57 0.00
145_P 27_S 0.57 0.00
127_A 51_L 0.57 0.00
112_L 89_D 0.57 0.00
116_G 95_T 0.56 0.00
56_S 101_A 0.56 0.00
2_K 110_P 0.56 0.00
90_R 25_A 0.56 0.00
76_K 48_V 0.55 0.00
23_P 32_G 0.55 0.00
40_S 56_K 0.55 0.00
108_K 16_H 0.55 0.00
18_R 2_R 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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