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OPENSEQ.org
L15 - S18
UniProt: Q5SHQ7 - Q5SLQ0
Length: 238
Sequences: 1175
Seq/Len: 5.57
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cR 3v2dP 3v2eR 3v2fPContact Map
2j002j00R 2j01P 2j02R 2j03PContact Map
4juw4juwR 4juxPContact Map
4kix4kixL 4kiyR 4kizL 4kj0R 4kj1L 4kj2R 4kj3L 4kj4RContact Map
4kj54kj5L 4kj6R 4kj7L 4kj8R 4kj9L 4kjaR 4kjbL 4kjcRContact Map
3knh3knhR 3kniP 3knjR 3knkPContact Map
3ohc3ohcR 3ohdR 3ohjP 3ohkPContact Map
3uz63uz6U 3uz7U 3uz8O 3uz9OContact Map
3oge3ogeR 3ogyR 3oh5P 3oh7PContact Map
3uyd3uydU 3uyeO 3uyfU 3uygOContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
15_R 44_L 0.90 0.01
80_Y 61_K 0.88 0.01
100_L 48_G 0.83 0.01
42_S 32_R 0.75 0.00
31_A 17_S 0.72 0.00
128_H 66_L 0.71 0.00
10_P 68_K 0.71 0.00
88_L 27_G 0.68 0.00
135_L 68_K 0.67 0.00
107_K 42_R 0.66 0.00
64_K 81_F 0.65 0.00
50_R 32_R 0.65 0.00
140_A 72_R 0.65 0.00
68_Q 81_F 0.64 0.00
68_Q 70_I 0.64 0.00
132_K 41_K 0.63 0.00
32_T 18_R 0.63 0.00
65_R 61_K 0.63 0.00
122_P 51_L 0.62 0.00
139_K 37_V 0.62 0.00
61_R 77_G 0.62 0.00
11_G 61_K 0.61 0.00
95_V 79_L 0.60 0.00
27_H 65_I 0.60 0.00
43_G 52_P 0.60 0.00
19_V 68_K 0.59 0.00
113_K 57_G 0.59 0.00
144_E 70_I 0.59 0.00
139_K 21_K 0.58 0.00
83_V 70_I 0.58 0.00
48_P 57_G 0.58 0.00
84_N 53_R 0.58 0.00
8_P 46_E 0.58 0.00
29_K 45_S 0.57 0.00
58_T 71_K 0.57 0.00
102_R 70_I 0.57 0.00
4_S 72_R 0.57 0.00
103_A 52_P 0.57 0.00
99_L 20_A 0.57 0.00
85_L 44_L 0.56 0.00
5_D 73_A 0.56 0.00
77_R 76_L 0.56 0.00
86_K 56_T 0.56 0.00
56_S 76_L 0.56 0.00
84_N 77_G 0.56 0.00
86_K 39_V 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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