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OPENSEQ.org
L15 - L35
UniProt: Q5SHQ7 - Q5SKU1
Length: 215
Sequences: 1238
Seq/Len: 5.98
I_Prob: 0.99
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dP8 3v2fP8Contact Map
2j002j01P8 2j03P8Contact Map
4juw4juxP8Contact Map
4kix4kixL3 4kizL3 4kj1L3 4kj3L3Contact Map
4kj54kj5L3 4kj7L3 4kj9L3 4kjbL3Contact Map
2zjr2zjrI3Contact Map
4btc4btdP8Contact Map
3uyd3uyeO8 3uygO8Contact Map
4gd13r8sL3 3r8tL3Contact Map
3knh3kniP8 3knkP8Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
59_L 9_G 2.19 0.99
62_L 30_R 1.69 0.96
59_L 7_H 1.02 0.60
65_R 25_M 1.00 0.58
68_Q 8_K 0.97 0.54
56_S 32_L 0.90 0.46
56_S 39_K 0.89 0.44
62_L 25_M 0.82 0.35
38_Q 63_P 0.81 0.35
90_R 51_A 0.79 0.32
33_R 53_P 0.76 0.28
137_K 40_E 0.75 0.28
68_Q 6_T 0.74 0.27
56_S 14_V 0.73 0.25
78_P 56_E 0.72 0.25
50_R 54_E 0.72 0.24
133_S 19_S 0.72 0.24
48_P 7_H 0.70 0.22
104_G 20_G 0.69 0.21
104_G 50_L 0.69 0.21
59_L 10_A 0.67 0.20
144_E 59_K 0.66 0.19
101_V 23_V 0.65 0.18
56_S 33_N 0.65 0.18
64_K 27_T 0.65 0.17
76_K 11_K 0.64 0.17
64_K 8_K 0.64 0.16
144_E 55_A 0.63 0.16
39_K 64_Y 0.62 0.15
56_S 12_K 0.61 0.14
60_M 44_K 0.61 0.14
49_R 60_L 0.61 0.14
30_T 44_K 0.60 0.14
95_V 10_A 0.60 0.13
3_L 39_K 0.60 0.13
81_Q 43_Q 0.59 0.13
137_K 26_K 0.59 0.13
21_R 3_K 0.59 0.13
81_Q 37_S 0.59 0.13
61_R 54_E 0.59 0.13
56_S 63_P 0.59 0.12
40_S 14_V 0.58 0.12
77_R 14_V 0.58 0.12
106_L 16_I 0.58 0.12
49_R 58_I 0.58 0.12
129_A 56_E 0.57 0.12
121_K 19_S 0.57 0.11
14_K 28_G 0.56 0.11
107_K 37_S 0.56 0.11
27_H 8_K 0.55 0.10
105_L 62_L 0.55 0.10
48_P 41_I 0.55 0.10
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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