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OPENSEQ.org
L15 - S15
UniProt: Q5SHQ7 - Q5SJ76
Length: 239
Sequences: 1343
Seq/Len: 5.79
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cO 3v2dP 3v2eO 3v2fPContact Map
2j002j00O 2j01P 2j02O 2j03PContact Map
4juw4juwO 4juxPContact Map
4kix4kixL 4kiyO 4kizL 4kj0O 4kj1L 4kj2O 4kj3L 4kj4OContact Map
4kj54kj5L 4kj6O 4kj7L 4kj8O 4kj9L 4kjaO 4kjbL 4kjcOContact Map
3ohc3ohcO 3ohdO 3ohjP 3ohkPContact Map
3knh3knhO 3kniP 3knjO 3knkPContact Map
3uz63uz6R 3uz7R 3uz8O 3uz9OContact Map
3oge3ogeO 3ogyO 3oh5P 3oh7PContact Map
3uyd3uydR 3uyeO 3uyfR 3uygOContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
137_K 35_R 0.86 0.00
122_P 1_M 0.83 0.00
60_M 48_K 0.74 0.00
12_A 59_M 0.73 0.00
70_Q 60_V 0.73 0.00
76_K 4_T 0.72 0.00
95_V 73_E 0.72 0.00
25_S 60_V 0.68 0.00
102_R 13_Q 0.66 0.00
35_H 59_M 0.65 0.00
138_L 73_E 0.64 0.00
6_L 14_E 0.62 0.00
145_P 38_R 0.62 0.00
99_L 87_I 0.61 0.00
36_K 1_M 0.61 0.00
64_K 46_H 0.61 0.00
38_Q 27_V 0.61 0.00
106_L 84_K 0.60 0.00
20_G 76_E 0.60 0.00
145_P 89_G 0.60 0.00
31_A 33_T 0.59 0.00
122_P 16_A 0.59 0.00
135_L 10_K 0.59 0.00
130_F 71_Q 0.59 0.00
95_V 9_Q 0.59 0.00
65_R 48_K 0.58 0.00
87_D 62_Q 0.58 0.00
65_R 3_I 0.57 0.00
43_G 70_L 0.57 0.00
59_L 35_R 0.56 0.00
65_R 37_N 0.56 0.00
45_L 25_T 0.56 0.00
133_S 81_L 0.56 0.00
140_A 13_Q 0.55 0.00
29_K 31_L 0.55 0.00
101_V 83_E 0.55 0.00
96_T 37_N 0.55 0.00
98_E 47_K 0.55 0.00
25_S 87_I 0.54 0.00
12_A 54_R 0.54 0.00
96_T 13_Q 0.54 0.00
78_P 87_I 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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