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OPENSEQ.org
L15 - L25
UniProt: Q5SHQ7 - Q5SHZ1
Length: 356
Sequences: 1233
Seq/Len: 3.77
I_Prob: 0.06
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dPZ 3v2fPZContact Map
2j002j01PZ 2j03PZContact Map
4juw4juxPZContact Map
4kix4kixLV 4kizLV 4kj1LV 4kj3LVContact Map
4kj54kj5LV 4kj7LV 4kj9LV 4kjbLVContact Map
2zjr2zjrISContact Map
4btc4btdPZContact Map
3uyd3uyeOV 3uygOVContact Map
4gd13r8sLV 3r8tLVContact Map
3knh3kniPZ 3knkPZContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
107_K 59_L 1.11 0.06
3_L 24_L 0.98 0.04
112_L 72_R 0.87 0.03
16_R 170_T 0.87 0.03
24_G 100_V 0.85 0.03
101_V 18_L 0.84 0.03
10_P 158_P 0.81 0.02
13_N 68_P 0.80 0.02
120_A 88_F 0.78 0.02
146_V 150_L 0.78 0.02
12_A 61_L 0.77 0.02
63_P 101_P 0.77 0.02
137_K 31_R 0.77 0.02
62_L 88_F 0.72 0.02
107_K 124_I 0.72 0.02
60_M 161_V 0.72 0.02
129_A 56_V 0.70 0.02
32_T 17_A 0.69 0.02
123_L 82_R 0.69 0.02
6_L 168_E 0.69 0.01
114_I 8_Y 0.68 0.01
19_V 6_K 0.67 0.01
105_L 12_G 0.66 0.01
40_S 94_E 0.66 0.01
1_M 77_D 0.65 0.01
95_V 102_L 0.65 0.01
76_K 90_V 0.65 0.01
137_K 14_K 0.65 0.01
19_V 157_L 0.65 0.01
135_L 35_R 0.65 0.01
112_L 66_S 0.65 0.01
141_A 96_V 0.65 0.01
117_E 80_R 0.64 0.01
90_R 139_V 0.64 0.01
15_R 144_L 0.64 0.01
123_L 26_G 0.63 0.01
95_V 96_V 0.63 0.01
31_A 2_E 0.63 0.01
83_V 66_S 0.63 0.01
95_V 88_F 0.63 0.01
129_A 86_V 0.63 0.01
131_S 36_K 0.63 0.01
55_R 77_D 0.62 0.01
146_V 18_L 0.62 0.01
40_S 15_P 0.62 0.01
140_A 177_P 0.61 0.01
116_G 74_V 0.61 0.01
124_K 71_V 0.61 0.01
82_G 77_D 0.61 0.01
24_G 70_L 0.60 0.01
117_E 105_V 0.60 0.01
50_R 73_Q 0.60 0.01
141_A 111_V 0.60 0.01
1_M 75_N 0.59 0.01
49_R 57_I 0.59 0.01
98_E 129_S 0.59 0.01
10_P 160_G 0.59 0.01
96_T 40_D 0.59 0.01
50_R 60_E 0.59 0.01
114_I 140_D 0.59 0.01
104_G 168_E 0.59 0.01
68_Q 105_V 0.59 0.01
14_K 4_R 0.59 0.01
58_T 120_I 0.59 0.01
10_P 66_S 0.59 0.01
6_L 166_S 0.58 0.01
1_M 73_Q 0.58 0.01
88_L 9_Y 0.58 0.01
119_E 67_L 0.58 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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