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OPENSEQ.org
L15 - L29
UniProt: Q5SHQ7 - Q5SHP6
Length: 222
Sequences: 1177
Seq/Len: 5.69
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoLOVContact Map
1vq81vq8LOVContact Map
1vqp1vqpLOVContact Map
1vqm1vqmLOVContact Map
1vql1vqlLOVContact Map
1vqk1vqkLOVContact Map
1yhq1yhqLOVContact Map
1s721s72LOVContact Map
1vq91vq9LOVContact Map
1vqn1vqnLOVContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
33_R 59_R 0.80 0.00
35_H 41_I 0.73 0.00
116_G 46_Q 0.69 0.00
7_R 14_R 0.69 0.00
44_G 43_Q 0.68 0.00
124_K 22_E 0.64 0.00
24_G 25_V 0.63 0.00
119_E 68_R 0.63 0.00
112_L 25_V 0.61 0.00
102_R 54_K 0.60 0.00
104_G 45_S 0.60 0.00
59_L 54_K 0.60 0.00
131_S 48_H 0.60 0.00
6_L 54_K 0.59 0.00
98_E 19_V 0.59 0.00
91_F 22_E 0.59 0.00
7_R 55_R 0.59 0.00
1_M 71_N 0.58 0.00
26_G 61_L 0.58 0.00
59_L 39_A 0.57 0.00
146_V 31_E 0.57 0.00
26_G 50_I 0.57 0.00
6_L 37_F 0.57 0.00
86_K 51_R 0.57 0.00
128_H 51_R 0.56 0.00
29_K 39_A 0.56 0.00
136_E 54_K 0.56 0.00
145_P 64_L 0.56 0.00
40_S 31_E 0.56 0.00
129_A 15_K 0.55 0.00
70_Q 61_L 0.54 0.00
25_S 61_L 0.54 0.00
42_S 47_N 0.54 0.00
49_R 48_H 0.54 0.00
136_E 55_R 0.54 0.00
65_R 38_Q 0.54 0.00
50_R 12_E 0.54 0.00
16_R 42_G 0.54 0.00
133_S 23_K 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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