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OPENSEQ.org
L15 - L22
UniProt: Q5SHQ7 - Q5SHP3
Length: 263
Sequences: 1409
Seq/Len: 5.55
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoLORContact Map
1vq81vq8LORContact Map
1vqp1vqpLORContact Map
1vqm1vqmLORContact Map
1vql1vqlLORContact Map
1vqk1vqkLORContact Map
1yhq1yhqLORContact Map
1s721s72LORContact Map
1vq91vq9LORContact Map
1vqn1vqnLORContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
9_N 43_G 0.77 0.00
56_S 65_L 0.68 0.00
137_K 19_L 0.67 0.00
96_T 68_R 0.66 0.00
36_K 24_I 0.65 0.00
21_R 98_K 0.64 0.00
122_P 87_P 0.63 0.00
132_K 42_R 0.63 0.00
6_L 93_A 0.63 0.00
49_R 63_D 0.61 0.00
33_R 95_I 0.60 0.00
89_A 50_V 0.60 0.00
137_K 50_V 0.59 0.00
145_P 21_V 0.59 0.00
139_K 54_A 0.59 0.00
23_P 38_Y 0.59 0.00
60_M 71_V 0.58 0.00
94_E 6_I 0.58 0.00
4_S 23_L 0.57 0.00
43_G 64_M 0.57 0.00
40_S 24_I 0.57 0.00
3_L 29_L 0.57 0.00
27_H 39_T 0.56 0.00
97_P 13_S 0.56 0.00
114_I 46_F 0.55 0.00
63_P 38_Y 0.55 0.00
108_K 70_Y 0.54 0.00
21_R 88_R 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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