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OPENSEQ.org
L15 - S13
UniProt: Q5SHQ7 - P80377
Length: 276
Sequences: 1375
Seq/Len: 5.17
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cM 3v2dP 3v2eM 3v2fPContact Map
2j002j00M 2j01P 2j02M 2j03PContact Map
4juw4juwM 4juxPContact Map
4kix4kixL 4kiyM 4kizL 4kj0M 4kj1L 4kj2M 4kj3L 4kj4MContact Map
4kj54kj5L 4kj6M 4kj7L 4kj8M 4kj9L 4kjaM 4kjbL 4kjcMContact Map
3ohc3ohcM 3ohdM 3ohjP 3ohkPContact Map
3knh3knhM 3kniP 3knjM 3knkPContact Map
3uz63uz6P 3uz7P 3uz8O 3uz9OContact Map
3u5b3u5cS 3u5ea 3u5gS 3u5iaContact Map
3oge3ogeM 3ogyM 3oh5P 3oh7PContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
8_P 18_A 0.94 0.01
59_L 46_K 0.78 0.01
137_K 41_P 0.72 0.01
43_G 88_R 0.72 0.01
1_M 82_M 0.71 0.01
9_N 61_E 0.69 0.01
143_G 80_R 0.69 0.01
69_G 8_E 0.68 0.01
12_A 73_E 0.67 0.01
45_L 50_E 0.66 0.01
88_L 111_K 0.66 0.01
56_S 5_A 0.65 0.01
13_N 31_K 0.65 0.01
145_P 7_V 0.65 0.00
144_E 50_E 0.65 0.00
114_I 114_R 0.64 0.00
40_S 119_G 0.64 0.00
83_V 28_A 0.64 0.00
132_K 35_E 0.64 0.00
95_V 60_V 0.64 0.00
39_K 50_E 0.63 0.00
5_D 18_A 0.63 0.00
119_E 56_L 0.62 0.00
33_R 73_E 0.62 0.00
66_G 111_K 0.62 0.00
62_L 107_A 0.62 0.00
70_Q 39_I 0.62 0.00
33_R 87_Y 0.62 0.00
4_S 63_T 0.61 0.00
115_L 21_Y 0.61 0.00
93_G 74_V 0.61 0.00
124_K 104_R 0.60 0.00
29_K 113_P 0.60 0.00
5_D 82_M 0.60 0.00
90_R 49_T 0.59 0.00
140_A 58_E 0.59 0.00
104_G 99_R 0.59 0.00
140_A 66_L 0.58 0.00
136_E 33_A 0.58 0.00
13_N 115_K 0.57 0.00
49_R 104_R 0.57 0.00
59_L 82_M 0.57 0.00
62_L 58_E 0.57 0.00
23_P 83_D 0.57 0.00
121_K 58_E 0.56 0.00
4_S 34_L 0.56 0.00
13_N 46_K 0.56 0.00
42_S 43_T 0.56 0.00
16_R 38_G 0.56 0.00
29_K 69_E 0.55 0.00
126_V 94_R 0.55 0.00
114_I 95_G 0.55 0.00
68_Q 27_K 0.55 0.00
56_S 18_A 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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