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OPENSEQ.org
L15 - L34
UniProt: Q5SHQ7 - P80340
Length: 199
Sequences: 1040
Seq/Len: 5.53
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dP7 3v2fP7Contact Map
2j002j01P7 2j03P7Contact Map
4juw4juxP7Contact Map
4kix4kixL2 4kizL2 4kj1L2 4kj3L2Contact Map
4kj54kj5L2 4kj7L2 4kj9L2 4kjbL2Contact Map
2zjr2zjrI2Contact Map
4btc4btdP7Contact Map
3uyd3uyeO7 3uygO7Contact Map
4gd13r8sL2 3r8tL2Contact Map
3knh3kniP7 3knkP7Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
48_P 15_T 0.90 0.01
64_K 16_H 0.79 0.01
23_P 14_K 0.75 0.00
7_R 10_R 0.75 0.00
42_S 25_P 0.74 0.00
65_R 11_K 0.71 0.00
40_S 14_K 0.70 0.00
147_L 37_K 0.69 0.00
106_L 43_T 0.69 0.00
33_R 2_K 0.69 0.00
59_L 19_R 0.67 0.00
94_E 37_K 0.66 0.00
132_K 36_Q 0.66 0.00
56_S 14_K 0.66 0.00
87_D 29_K 0.65 0.00
58_T 1_M 0.64 0.00
33_R 12_R 0.64 0.00
30_T 2_K 0.63 0.00
13_N 5_W 0.62 0.00
21_R 16_H 0.62 0.00
141_A 43_T 0.61 0.00
1_M 1_M 0.61 0.00
3_L 15_T 0.61 0.00
59_L 36_Q 0.60 0.00
102_R 24_T 0.60 0.00
98_E 24_T 0.60 0.00
91_F 36_Q 0.60 0.00
135_L 29_K 0.59 0.00
32_T 31_L 0.58 0.00
29_K 2_K 0.58 0.00
7_R 23_R 0.57 0.00
124_K 44_P 0.57 0.00
124_K 20_A 0.56 0.00
117_E 31_L 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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