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OPENSEQ.org
L15 - L28
UniProt: Q5SHQ7 - P60494
Length: 248
Sequences: 1124
Seq/Len: 5.46
I_Prob: 0.04
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dP1 3v2fP1Contact Map
2j002j01P1 2j03P1Contact Map
4juw4juxP1Contact Map
4kix4kixLX 4kizLX 4kj1LX 4kj3LXContact Map
4kj54kj5LX 4kj7LX 4kj9LX 4kjbLXContact Map
2zjr2zjrIUContact Map
4btc4btdP1Contact Map
3uyd3uyeOZ 3uygOZContact Map
4gd13r8sLX 3r8tLXContact Map
3knh3kniP1 3knkP1Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
60_M 35_T 1.03 0.04
9_N 74_V 0.89 0.03
103_A 44_P 0.84 0.02
135_L 50_R 0.75 0.02
6_L 59_T 0.75 0.02
69_G 40_R 0.74 0.02
137_K 21_R 0.72 0.01
33_R 61_R 0.69 0.01
13_N 64_A 0.67 0.01
24_G 73_L 0.65 0.01
122_P 62_V 0.64 0.01
145_P 44_P 0.64 0.01
42_S 2_S 0.64 0.01
82_G 47_Q 0.63 0.01
100_L 53_V 0.63 0.01
122_P 67_I 0.62 0.01
60_M 37_I 0.61 0.01
122_P 11_R 0.61 0.01
40_S 4_V 0.61 0.01
35_H 12_P 0.59 0.01
120_A 54_A 0.59 0.01
65_R 35_T 0.59 0.01
57_T 15_A 0.59 0.01
59_L 37_I 0.59 0.01
141_A 50_R 0.58 0.01
4_S 40_R 0.56 0.01
114_I 17_S 0.55 0.01
131_S 9_G 0.55 0.01
140_A 74_V 0.55 0.01
12_A 60_F 0.55 0.01
140_A 11_R 0.55 0.01
50_R 19_Q 0.54 0.01
131_S 47_Q 0.54 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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