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OPENSEQ.org
L15 - L27
UniProt: Q5SHQ7 - P60493
Length: 235
Sequences: 1401
Seq/Len: 6.17
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dP0 3v2fP0Contact Map
2j002j01P0 2j03P0Contact Map
4juw4juxP0Contact Map
4kix4kixLW 4kizLW 4kj1LW 4kj3LWContact Map
4kj54kj5LW 4kj7LW 4kj9LW 4kjbLWContact Map
2zjr2zjrITContact Map
4btc4btdP0Contact Map
3uyd3uyeO3 3uygO3Contact Map
4gd13r8sLW 3r8tLWContact Map
3ohc3ohjP0 3ohkP0Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
81_Q 62_L 0.79 0.00
122_P 55_R 0.75 0.00
56_S 3_H 0.72 0.00
38_Q 21_L 0.69 0.00
138_L 8_G 0.68 0.00
58_T 59_L 0.65 0.00
136_E 23_V 0.64 0.00
83_V 84_L 0.63 0.00
116_G 76_G 0.62 0.00
41_R 16_S 0.61 0.00
3_L 20_R 0.61 0.00
17_K 78_Y 0.59 0.00
137_K 33_A 0.59 0.00
33_R 10_T 0.57 0.00
125_V 44_R 0.57 0.00
58_T 51_V 0.57 0.00
135_L 49_K 0.56 0.00
7_R 76_G 0.56 0.00
6_L 17_Q 0.56 0.00
29_K 2_A 0.54 0.00
35_H 11_R 0.54 0.00
77_R 35_N 0.54 0.00
43_G 83_P 0.53 0.00
79_R 78_Y 0.53 0.00
85_L 10_T 0.52 0.00
50_R 51_V 0.52 0.00
39_K 83_P 0.52 0.00
6_L 28_G 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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