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OPENSEQ.org
L15 - L21
UniProt: Q5SHQ7 - P60492
Length: 251
Sequences: 1340
Seq/Len: 5.49
I_Prob: 0.97
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dPV 3v2fPVContact Map
2j002j01PV 2j03PVContact Map
4juw4juxPVContact Map
4kix4kixLR 4kizLR 4kj1LR 4kj3LRContact Map
4kj54kj5LR 4kj7LR 4kj9LR 4kjbLRContact Map
2zjr2zjrIOContact Map
4btc4btdPVContact Map
3uyd3uyeO2 3uygO2Contact Map
4gd13r8sLR 3r8tLRContact Map
3knh3kniPV 3knkPVContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
24_G 82_R 1.80 0.97
23_P 80_Q 1.72 0.96
35_H 79_V 0.94 0.46
23_P 78_K 0.92 0.43
23_P 82_R 0.83 0.33
17_K 75_F 0.81 0.31
15_R 31_A 0.71 0.20
23_P 79_V 0.70 0.20
89_A 96_I 0.68 0.18
24_G 72_V 0.66 0.16
31_A 67_G 0.66 0.16
129_A 80_Q 0.63 0.14
145_P 6_K 0.62 0.13
35_H 80_Q 0.62 0.13
1_M 41_G 0.62 0.13
5_D 28_E 0.62 0.13
84_N 66_R 0.61 0.12
85_L 63_G 0.60 0.12
129_A 101_G 0.60 0.12
42_S 73_S 0.60 0.12
65_R 7_T 0.59 0.12
46_K 26_D 0.59 0.11
60_M 71_L 0.59 0.11
23_P 83_R 0.59 0.11
50_R 38_L 0.58 0.11
29_K 80_Q 0.57 0.10
45_L 85_K 0.56 0.10
40_S 6_K 0.56 0.09
137_K 72_V 0.56 0.09
125_V 44_K 0.55 0.09
23_P 66_R 0.55 0.09
106_L 91_Y 0.55 0.09
148_L 29_P 0.55 0.09
31_A 76_K 0.54 0.09
65_R 75_F 0.54 0.08
122_P 68_K 0.53 0.08
49_R 15_E 0.53 0.08
82_G 6_K 0.52 0.08
87_D 32_T 0.52 0.07
43_G 73_S 0.52 0.07
129_A 63_G 0.52 0.07
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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