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OPENSEQ.org
L15 - L20
UniProt: Q5SHQ7 - P60491
Length: 268
Sequences: 1277
Seq/Len: 4.91
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dPU 3v2fPUContact Map
2j002j01PU 2j03PUContact Map
4juw4juxPUContact Map
4kix4kixLQ 4kizLQ 4kj1LQ 4kj3LQContact Map
4kj54kj5LQ 4kj7LQ 4kj9LQ 4kjbLQContact Map
2zjr2zjrINContact Map
4btc4btdPUContact Map
3uyd3uyeO1 3uygO1Contact Map
4gd13r8sLQ 3r8tLQContact Map
3ohc3ohjPU 3ohkPUContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
65_R 30_K 0.90 0.01
45_L 47_Y 0.83 0.01
148_L 85_K 0.82 0.01
102_R 116_A 0.78 0.00
59_L 42_A 0.78 0.00
126_V 83_L 0.74 0.00
131_S 10_R 0.73 0.00
122_P 98_L 0.72 0.00
23_P 17_I 0.72 0.00
14_K 24_Y 0.69 0.00
56_S 39_L 0.68 0.00
31_A 25_W 0.66 0.00
131_S 42_A 0.64 0.00
88_L 69_C 0.64 0.00
95_V 73_G 0.63 0.00
1_M 19_K 0.63 0.00
31_A 63_V 0.63 0.00
1_M 93_K 0.62 0.00
124_K 107_A 0.62 0.00
83_V 63_V 0.61 0.00
55_R 39_L 0.60 0.00
99_L 113_A 0.59 0.00
130_F 72_H 0.59 0.00
78_P 90_V 0.58 0.00
82_G 71_Q 0.58 0.00
65_R 15_K 0.58 0.00
1_M 22_K 0.58 0.00
146_V 113_A 0.58 0.00
48_P 109_L 0.57 0.00
6_L 72_H 0.57 0.00
23_P 33_R 0.57 0.00
145_P 79_F 0.57 0.00
112_L 115_A 0.56 0.00
21_R 10_R 0.56 0.00
102_R 87_G 0.56 0.00
60_M 57_F 0.56 0.00
59_L 98_L 0.56 0.00
35_H 41_A 0.56 0.00
35_H 47_Y 0.56 0.00
132_K 108_E 0.56 0.00
49_R 12_R 0.56 0.00
14_K 51_K 0.55 0.00
1_M 20_L 0.55 0.00
6_L 116_A 0.55 0.00
5_D 17_I 0.55 0.00
39_K 36_R 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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