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OPENSEQ.org
L30 - L31
UniProt: Q5SHQ6 - Q5SJE1
Length: 131
Sequences: 1053
Seq/Len: 8.49
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d34 3v2f34Contact Map
2j002j0134 2j0334Contact Map
4juw4jux34Contact Map
4btc4btd34Contact Map
3uyd3uyeX4 3uygX4Contact Map
3knh3kni34 3knk34Contact Map
3ohc3ohj34 3ohk34Contact Map
3ohy3ohz34 3oi134Contact Map
3v223v2334 3v2534Contact Map
3uz63uz8X4 3uz9X4Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
59_V 56_V 0.85 0.00
42_A 58_R 0.79 0.00
35_R 62_R 0.73 0.00
25_A 12_A 0.69 0.00
54_V 15_I 0.67 0.00
53_L 48_R 0.67 0.00
1_M 50_V 0.66 0.00
52_H 58_R 0.63 0.00
20_K 57_E 0.62 0.00
17_K 32_Y 0.61 0.00
55_R 35_V 0.61 0.00
47_V 63_Y 0.60 0.00
6_V 2_K 0.60 0.00
24_K 50_V 0.59 0.00
17_K 61_R 0.58 0.00
14_G 19_G 0.57 0.00
39_D 53_E 0.56 0.00
48_E 65_D 0.55 0.00
20_K 15_I 0.54 0.00
49_K 41_P 0.54 0.00
23_L 48_R 0.52 0.00
39_D 25_Y 0.51 0.00
44_R 53_E 0.50 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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