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OPENSEQ.org
L30 - L36
UniProt: Q5SHQ6 - Q5SHR2
Length: 97
Sequences: 637
Seq/Len: 6.57
I_Prob: 0.04
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d39 3v2f39Contact Map
2j002j0139 2j0339Contact Map
4juw4jux39Contact Map
4kix4kixZ4 4kizZ4 4kj1Z4 4kj3Z4Contact Map
4kj54kj5Z4 4kj7Z4 4kj9Z4 4kjbZ4Contact Map
2zjr2zjrW4Contact Map
4btc4btd39Contact Map
4gd13r8sZ4 3r8tZ4Contact Map
3knh3kni39 3knk39Contact Map
3v223v2339 3v2539Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
5_K 22_R 1.03 0.04
22_A 29_N 0.79 0.02
20_K 5_A 0.78 0.02
52_H 29_N 0.77 0.02
30_R 35_R 0.76 0.02
11_S 9_R 0.74 0.02
49_K 23_V 0.73 0.02
4_L 30_P 0.69 0.01
20_K 24_Y 0.69 0.01
17_K 24_Y 0.68 0.01
20_K 31_K 0.68 0.01
59_V 17_I 0.68 0.01
56_V 21_G 0.67 0.01
46_N 4_R 0.67 0.01
14_G 27_C 0.65 0.01
56_V 31_K 0.63 0.01
23_L 22_R 0.63 0.01
39_D 37_G 0.63 0.01
53_L 31_K 0.63 0.01
23_L 35_R 0.62 0.01
25_A 29_N 0.61 0.01
6_V 30_P 0.61 0.01
54_V 30_P 0.60 0.01
14_G 32_H 0.60 0.01
12_P 22_R 0.59 0.01
37_L 5_A 0.58 0.01
46_N 18_R 0.57 0.01
9_V 31_K 0.57 0.01
32_Q 3_V 0.57 0.01
6_V 1_M 0.56 0.01
52_H 12_D 0.56 0.01
14_G 11_C 0.54 0.01
30_R 26_I 0.54 0.01
19_Q 12_D 0.54 0.01
55_R 16_V 0.54 0.01
8_L 32_H 0.52 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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