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OPENSEQ.org
L30 - S12
UniProt: Q5SHQ6 - Q5SHN3
Length: 192
Sequences: 674
Seq/Len: 3.64
I_Prob: 0.46
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cL 3v2d3 3v2eL 3v2f3Contact Map
2j002j00L 2j013 2j02L 2j033Contact Map
4juw4juwL 4jux3Contact Map
4kix4kixZ 4kiyL 4kizZ 4kj0L 4kj1Z 4kj2L 4kj3Z 4kj4LContact Map
4kj54kj5Z 4kj6L 4kj7Z 4kj8L 4kj9Z 4kjaL 4kjbZ 4kjcLContact Map
3ohc3ohcL 3ohdL 3ohj3 3ohk3Contact Map
3knh3knhL 3kni3 3knjL 3knk3Contact Map
3uz63uz6O 3uz7O 3uz8X 3uz9XContact Map
3oge3ogeL 3ogyL 3oh53 3oh73Contact Map
3uyd3uydO 3uyeX 3uyfO 3uygXContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
19_Q 68_P 1.33 0.46
52_H 68_P 1.15 0.30
37_L 65_A 1.01 0.20
25_A 65_A 0.99 0.19
15_Y 101_V 0.91 0.14
35_R 54_K 0.90 0.13
32_Q 60_G 0.89 0.13
8_L 5_N 0.88 0.12
49_K 58_T 0.87 0.12
56_V 120_K 0.84 0.11
10_K 101_V 0.84 0.11
7_K 30_R 0.84 0.11
29_R 82_I 0.78 0.08
33_Q 58_T 0.77 0.08
42_A 96_H 0.76 0.08
4_L 53_A 0.75 0.08
12_P 35_T 0.74 0.07
14_G 54_K 0.73 0.07
46_N 56_R 0.72 0.07
21_A 27_A 0.70 0.06
22_A 2_P 0.70 0.06
14_G 22_P 0.70 0.06
8_L 70_E 0.69 0.06
48_E 16_R 0.69 0.06
53_L 64_T 0.68 0.05
24_K 104_A 0.68 0.05
24_K 82_I 0.67 0.05
12_P 30_R 0.67 0.05
11_S 82_I 0.66 0.05
20_K 104_A 0.66 0.05
52_H 61_Y 0.65 0.05
8_L 79_V 0.64 0.04
25_A 105_A 0.64 0.04
34_E 70_E 0.64 0.04
20_K 53_A 0.64 0.04
13_I 26_G 0.64 0.04
11_S 96_H 0.63 0.04
43_I 14_K 0.63 0.04
16_P 2_P 0.63 0.04
24_K 124_E 0.63 0.04
46_N 60_G 0.63 0.04
28_L 8_V 0.63 0.04
60_E 56_R 0.62 0.04
47_V 20_K 0.62 0.04
40_T 58_T 0.62 0.04
37_L 30_R 0.62 0.04
35_R 105_A 0.62 0.04
50_V 25_K 0.62 0.04
22_A 97_I 0.62 0.04
14_G 49_L 0.62 0.04
16_P 68_P 0.62 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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