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OPENSEQ.org
S05 - S06
UniProt: Q5SHQ5 - Q5SLP8
Length: 263
Sequences: 1035
Seq/Len: 4.04
I_Prob: 0.11
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeEFContact Map
3v2c3v2cEF 3v2eEFContact Map
2uub2uubEFContact Map
2j002j00EF 2j02EFContact Map
3t1y3t1yEFContact Map
4juw4juwEFContact Map
2uua2uuaEFContact Map
4b3m4b3mEFContact Map
2uxc2uxcEFContact Map
4kix4kiyEF 4kj0EF 4kj2EF 4kj4EFContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
36_D 91_V 1.14 0.11
110_L 83_D 1.07 0.09
36_D 74_D 0.84 0.04
135_T 81_I 0.82 0.04
82_V 86_R 0.81 0.04
119_L 72_V 0.80 0.04
141_Q 95_E 0.78 0.03
159_Q 89_M 0.76 0.03
64_R 13_N 0.75 0.03
41_V 92_K 0.75 0.03
96_P 92_K 0.74 0.03
153_K 60_F 0.73 0.03
98_T 44_G 0.73 0.03
25_R 77_R 0.72 0.03
133_Y 65_V 0.72 0.03
24_R 86_R 0.71 0.03
101_I 44_G 0.71 0.03
138_A 83_D 0.70 0.03
43_L 47_R 0.70 0.02
49_P 79_L 0.70 0.02
129_I 76_A 0.70 0.02
119_L 27_Q 0.69 0.02
11_I 29_A 0.69 0.02
63_R 77_R 0.69 0.02
133_Y 6_V 0.68 0.02
65_N 37_V 0.68 0.02
19_M 88_V 0.68 0.02
90_V 2_R 0.67 0.02
120_T 53_A 0.67 0.02
100_V 12_P 0.67 0.02
87_S 29_A 0.67 0.02
41_V 31_E 0.66 0.02
5_D 10_L 0.66 0.02
3_E 34_G 0.66 0.02
8_E 85_V 0.66 0.02
120_T 42_E 0.66 0.02
95_A 7_N 0.66 0.02
138_A 78_E 0.66 0.02
26_F 44_G 0.66 0.02
148_V 3_R 0.66 0.02
8_E 21_L 0.65 0.02
72_Q 10_L 0.65 0.02
100_V 46_R 0.65 0.02
90_V 24_E 0.65 0.02
125_S 89_M 0.65 0.02
74_G 94_Q 0.64 0.02
118_I 68_P 0.64 0.02
19_M 55_D 0.64 0.02
120_T 29_A 0.64 0.02
147_D 70_D 0.64 0.02
78_H 31_E 0.64 0.02
20_Q 77_R 0.64 0.02
12_L 53_A 0.64 0.02
87_S 77_R 0.63 0.02
118_I 34_G 0.63 0.02
136_M 42_E 0.63 0.02
41_V 37_V 0.63 0.02
76_I 10_L 0.63 0.02
143_R 10_L 0.62 0.02
141_Q 32_N 0.62 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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