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OPENSEQ.org
S05 - S12
UniProt: Q5SHQ5 - Q5SHN3
Length: 294
Sequences: 917
Seq/Len: 3.25
I_Prob: 0.14
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeELContact Map
3v2c3v2cEL 3v2eELContact Map
2uub2uubELContact Map
2j002j00EL 2j02ELContact Map
3t1y3t1yELContact Map
4juw4juwELContact Map
2uua2uuaELContact Map
4b3m4b3mELContact Map
2uxc2uxcELContact Map
4kix4kiyEL 4kj0EL 4kj2EL 4kj4ELContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
133_Y 36_V 1.20 0.14
127_N 52_V 1.19 0.13
24_R 10_K 1.13 0.11
33_V 98_V 1.09 0.10
119_L 36_V 1.09 0.10
123_L 53_A 1.04 0.08
101_I 60_G 0.96 0.06
10_M 113_S 0.95 0.06
119_L 38_R 0.94 0.06
5_D 30_R 0.93 0.06
63_R 70_E 0.93 0.06
143_R 105_A 0.89 0.05
117_D 93_V 0.89 0.05
27_R 36_V 0.89 0.05
129_I 40_V 0.89 0.05
129_I 38_R 0.89 0.05
126_R 53_A 0.89 0.05
131_I 58_T 0.88 0.05
58_A 21_V 0.88 0.05
146_A 14_K 0.87 0.05
16_T 35_T 0.86 0.04
16_T 58_T 0.86 0.04
43_L 121_K 0.84 0.04
151_L 19_S 0.84 0.04
56_Q 79_V 0.84 0.04
100_V 30_R 0.83 0.04
101_I 34_C 0.83 0.04
90_V 14_K 0.82 0.04
127_N 40_V 0.82 0.04
36_D 11_G 0.82 0.04
66_M 5_N 0.81 0.04
129_I 52_V 0.81 0.04
58_A 40_V 0.81 0.04
18_R 23_A 0.81 0.04
117_D 82_I 0.80 0.04
150_R 109_D 0.80 0.04
3_E 13_E 0.80 0.04
98_T 60_G 0.80 0.04
3_E 124_E 0.79 0.04
93_P 18_K 0.79 0.04
145_K 13_E 0.79 0.03
110_L 25_K 0.79 0.03
129_I 15_V 0.79 0.03
38_Q 101_V 0.78 0.03
127_N 38_R 0.78 0.03
3_E 21_V 0.77 0.03
59_G 68_P 0.77 0.03
106_P 93_V 0.76 0.03
4_T 105_A 0.76 0.03
27_R 38_R 0.76 0.03
110_L 40_V 0.75 0.03
110_L 58_T 0.75 0.03
154_G 96_H 0.74 0.03
159_Q 79_V 0.74 0.03
133_Y 11_G 0.74 0.03
145_K 14_K 0.74 0.03
146_A 54_K 0.74 0.03
49_P 113_S 0.72 0.03
127_N 36_V 0.72 0.03
49_P 65_A 0.72 0.03
53_L 79_V 0.72 0.03
7_E 40_V 0.71 0.03
64_R 56_R 0.71 0.03
38_Q 56_R 0.71 0.03
72_Q 70_E 0.71 0.02
63_R 68_P 0.70 0.02
80_I 49_L 0.70 0.02
122_E 101_V 0.70 0.02
32_V 53_A 0.70 0.02
98_T 34_C 0.70 0.02
58_A 25_K 0.70 0.02
63_R 65_A 0.70 0.02
117_D 97_I 0.69 0.02
117_D 40_V 0.69 0.02
112_L 105_A 0.69 0.02
16_T 36_V 0.69 0.02
136_M 58_T 0.69 0.02
156_A 112_K 0.69 0.02
68_E 109_D 0.69 0.02
137_E 61_Y 0.68 0.02
123_L 54_K 0.68 0.02
95_A 58_T 0.68 0.02
83_E 70_E 0.68 0.02
101_I 35_T 0.68 0.02
75_T 93_V 0.68 0.02
70_P 64_T 0.68 0.02
3_E 16_R 0.67 0.02
153_K 29_F 0.67 0.02
129_I 27_A 0.67 0.02
36_D 122_P 0.67 0.02
95_A 70_E 0.67 0.02
80_I 8_V 0.67 0.02
76_I 68_P 0.66 0.02
3_E 17_K 0.66 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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