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OPENSEQ.org
S05 - S11
UniProt: Q5SHQ5 - P80376
Length: 291
Sequences: 1123
Seq/Len: 3.95
I_Prob: 0.06
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeEKContact Map
3v2c3v2cEK 3v2eEKContact Map
2uub2uubEKContact Map
2j002j00EK 2j02EKContact Map
3t1y3t1yEKContact Map
4juw4juwEKContact Map
2uua2uuaEKContact Map
4b3m4b3mEKContact Map
2uxc2uxcEKContact Map
4kix4kiyEK 4kj0EK 4kj2EK 4kj4EKContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
127_N 127_K 1.10 0.06
50_E 53_S 1.09 0.06
76_I 23_A 1.04 0.05
52_P 64_A 0.99 0.04
120_T 93_Q 0.99 0.04
5_D 9_K 0.99 0.04
9_K 101_S 0.96 0.04
157_H 4_K 0.89 0.03
147_D 3_K 0.87 0.03
17_A 77_M 0.85 0.03
36_D 56_G 0.85 0.03
9_K 23_A 0.84 0.03
66_M 93_Q 0.84 0.03
117_D 97_A 0.84 0.03
4_T 9_K 0.82 0.03
120_T 18_R 0.82 0.03
8_E 48_I 0.81 0.03
131_I 5_P 0.81 0.02
115_V 18_R 0.80 0.02
138_A 7_K 0.79 0.02
155_E 4_K 0.77 0.02
121_K 118_G 0.77 0.02
60_Y 96_R 0.77 0.02
118_I 47_V 0.77 0.02
147_D 4_K 0.76 0.02
95_A 24_S 0.76 0.02
32_V 77_M 0.75 0.02
118_I 10_V 0.75 0.02
111_E 121_P 0.75 0.02
18_R 96_R 0.75 0.02
78_H 81_D 0.75 0.02
149_E 49_G 0.75 0.02
73_N 105_V 0.74 0.02
20_Q 59_Y 0.74 0.02
101_I 31_T 0.74 0.02
14_R 12_R 0.73 0.02
66_M 36_D 0.73 0.02
96_P 71_K 0.73 0.02
115_V 32_I 0.73 0.02
15_R 118_G 0.73 0.02
38_Q 95_I 0.73 0.02
13_I 99_Q 0.72 0.02
48_A 68_A 0.72 0.02
131_I 21_I 0.72 0.02
20_Q 38_N 0.72 0.02
3_E 1_M 0.71 0.02
109_I 73_M 0.71 0.02
148_V 63_L 0.71 0.02
79_E 6_S 0.71 0.02
118_I 3_K 0.71 0.02
79_E 95_I 0.70 0.02
57_K 116_H 0.70 0.02
133_Y 1_M 0.70 0.02
74_G 5_P 0.70 0.02
79_E 35_P 0.70 0.02
64_R 122_K 0.70 0.02
98_T 119_C 0.70 0.02
78_H 95_I 0.70 0.02
90_V 70_K 0.70 0.02
95_A 59_Y 0.69 0.02
50_E 70_K 0.69 0.02
11_I 5_P 0.69 0.02
52_P 54_R 0.69 0.01
75_T 1_M 0.69 0.01
20_Q 34_D 0.68 0.01
28_F 25_Y 0.68 0.01
15_R 42_W 0.68 0.01
80_I 1_M 0.68 0.01
46_G 57_T 0.68 0.01
27_R 65_A 0.68 0.01
78_H 100_A 0.68 0.01
67_V 40_I 0.68 0.01
158_A 105_V 0.68 0.01
148_V 105_V 0.67 0.01
101_I 119_C 0.67 0.01
73_N 24_S 0.67 0.01
83_E 72_A 0.67 0.01
22_G 118_G 0.67 0.01
3_E 40_I 0.66 0.01
148_V 39_P 0.66 0.01
89_I 114_V 0.66 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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