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OPENSEQ.org

S05 - S07
UniProt: Q5SHQ5 - P17291
Length: 318
Sequences: 1256
Seq/Len: 4.01
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeEGContact Map
3v2c3v2cEG 3v2eEGContact Map
2uub2uubEGContact Map
2j002j00EG 2j02EGContact Map
3t1y3t1yEGContact Map
4juw4juwEGContact Map
2uua2uuaEGContact Map
4b3m4b3mEGContact Map
2uxc2uxcEGContact Map
4kix4kiyEG 4kj0EG 4kj2EG 4kj4EGContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
27_R 152_A 0.95 0.01
72_Q 4_R 0.90 0.01
151_L 152_A 0.88 0.01
156_A 12_L 0.87 0.01
28_F 147_A 0.86 0.01
86_A 40_A 0.86 0.01
33_V 61_V 0.84 0.01
139_L 43_F 0.84 0.01
110_L 154_Y 0.83 0.01
74_G 4_R 0.82 0.01
17_A 17_V 0.81 0.01
13_I 9_V 0.81 0.01
98_T 83_A 0.80 0.01
17_A 147_A 0.80 0.01
83_E 41_R 0.79 0.01
82_V 135_V 0.78 0.01
92_K 2_A 0.78 0.01
136_M 11_Q 0.78 0.01
118_I 120_I 0.77 0.01
22_G 148_N 0.77 0.01
38_Q 137_K 0.77 0.01
154_G 13_Q 0.77 0.01
82_V 130_G 0.76 0.01
79_E 124_L 0.75 0.01
143_R 43_F 0.74 0.01
46_G 89_M 0.73 0.01
79_E 115_R 0.73 0.01
24_R 113_E 0.73 0.01
9_K 138_K 0.73 0.01
73_N 4_R 0.73 0.01
156_A 11_Q 0.72 0.01
132_A 96_Q 0.72 0.00
85_G 61_V 0.72 0.00
141_Q 124_L 0.72 0.00
78_H 118_V 0.72 0.00
91_L 47_C 0.72 0.00
150_R 97_Q 0.72 0.00
142_L 36_K 0.71 0.00
116_T 59_L 0.70 0.00
15_R 79_R 0.70 0.00
119_L 40_A 0.69 0.00
83_E 52_E 0.69 0.00
91_L 6_R 0.69 0.00
65_N 100_A 0.68 0.00
16_T 152_A 0.68 0.00
127_N 19_G 0.68 0.00
100_V 29_K 0.68 0.00
144_T 30_I 0.67 0.00
87_S 125_M 0.67 0.00
45_F 149_R 0.67 0.00
15_R 85_Y 0.67 0.00
146_A 2_A 0.67 0.00
54_A 66_V 0.67 0.00
132_A 16_L 0.67 0.00
116_T 53_K 0.67 0.00
65_N 64_Q 0.66 0.00
110_L 20_D 0.66 0.00
75_T 128_A 0.66 0.00
131_I 17_V 0.66 0.00
15_R 86_Q 0.66 0.00
49_P 130_G 0.66 0.00
10_M 73_M 0.66 0.00
15_R 76_R 0.66 0.00
126_R 93_P 0.66 0.00
88_K 39_A 0.66 0.00
144_T 64_Q 0.65 0.00
85_G 58_P 0.65 0.00
85_G 113_E 0.65 0.00
69_V 19_G 0.65 0.00
4_T 89_M 0.65 0.00
118_I 89_M 0.65 0.00
136_M 41_R 0.65 0.00
127_N 83_A 0.65 0.00
141_Q 134_A 0.65 0.00
36_D 2_A 0.65 0.00
89_I 57_E 0.65 0.00
5_D 7_A 0.64 0.00
48_A 138_K 0.64 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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