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OPENSEQ.org
L18 - S16
UniProt: Q5SHQ4 - Q5SJH3
Length: 200
Sequences: 1292
Seq/Len: 6.63
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cP 3v2dS 3v2eP 3v2fSContact Map
2j002j00P 2j01S 2j02P 2j03SContact Map
4juw4juwP 4juxSContact Map
4kix4kixO 4kiyP 4kizO 4kj0P 4kj1O 4kj2P 4kj3O 4kj4PContact Map
4kj54kj5O 4kj6P 4kj7O 4kj8P 4kj9O 4kjaP 4kjbO 4kjcPContact Map
3ohc3ohcP 3ohdP 3ohjS 3ohkSContact Map
3knh3knhP 3kniS 3knjP 3knkSContact Map
3uz63uz6S 3uz7S 3uz8Q 3uz9QContact Map
3oge3ogeP 3ogyP 3oh5S 3oh7SContact Map
3uyd3uydS 3uyeQ 3uyfS 3uygQContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
103_E 86_E 0.82 0.00
32_L 14_N 0.70 0.00
10_R 18_R 0.69 0.00
41_D 20_V 0.66 0.00
7_Y 45_T 0.63 0.00
60_G 39_Y 0.63 0.00
95_H 34_E 0.62 0.00
59_K 54_E 0.61 0.00
11_K 18_R 0.61 0.00
98_V 38_Y 0.61 0.00
58_L 2_V 0.61 0.00
26_L 67_T 0.60 0.00
98_V 12_K 0.60 0.00
102_A 25_R 0.59 0.00
58_L 25_R 0.58 0.00
104_G 81_R 0.56 0.00
69_V 80_F 0.56 0.00
101_L 67_T 0.55 0.00
9_R 65_Q 0.55 0.00
66_A 36_I 0.54 0.00
98_V 16_H 0.54 0.00
54_L 7_A 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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