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OPENSEQ.org
L18 - S14
UniProt: Q5SHQ4 - Q5SHQ1
Length: 173
Sequences: 1233
Seq/Len: 7.21
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cN 3v2dS 3v2eN 3v2fSContact Map
2j002j00N 2j01S 2j02N 2j03SContact Map
4juw4juwN 4juxSContact Map
3knh3knhN 3kniS 3knjN 3knkSContact Map
3ohc3ohcN 3ohdN 3ohjS 3ohkSContact Map
3uz63uz6Q 3uz7Q 3uz8Q 3uz9QContact Map
3oge3ogeN 3ogyN 3oh5S 3oh7SContact Map
3uyd3uydQ 3uyeQ 3uyfQ 3uygQContact Map
3f1e3f1eN 3f1fS 3f1gN 3f1hSContact Map
3ohy3ohyN 3ohzS 3oi0N 3oi1SContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
81_G 38_G 0.90 0.01
11_K 49_H 0.82 0.01
92_Y 25_V 0.79 0.01
10_R 39_L 0.76 0.01
6_A 32_S 0.75 0.01
36_Y 59_A 0.74 0.01
79_A 59_A 0.70 0.00
5_T 8_E 0.64 0.00
63_T 57_R 0.63 0.00
45_G 33_V 0.62 0.00
24_L 48_A 0.61 0.00
18_I 34_Y 0.61 0.00
97_R 37_F 0.61 0.00
91_P 17_K 0.60 0.00
111_E 4_K 0.60 0.00
91_P 30_A 0.59 0.00
67_R 17_K 0.59 0.00
81_G 30_A 0.58 0.00
8_E 11_K 0.57 0.00
74_A 37_F 0.56 0.00
19_K 59_A 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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