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OPENSEQ.org
L18 - L24
UniProt: Q5SHQ4 - Q5SHP9
Length: 222
Sequences: 1367
Seq/Len: 6.45
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dSY 3v2fSYContact Map
2j002j01SY 2j03SYContact Map
4juw4juxSYContact Map
4kix4kixOU 4kizOU 4kj1OU 4kj3OUContact Map
4kj54kj5OU 4kj7OU 4kj9OU 4kjbOUContact Map
2zjr2zjrLRContact Map
4btc4btdSYContact Map
3uyd3uyeQU 3uygQUContact Map
4gd13r8sOU 3r8tOUContact Map
3ohc3ohjSY 3ohkSYContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
66_A 45_V 0.80 0.00
12_F 100_A 0.67 0.00
21_T 106_L 0.64 0.00
99_K 10_G 0.64 0.00
57_K 37_V 0.63 0.00
16_N 40_E 0.62 0.00
103_E 58_G 0.60 0.00
58_L 78_A 0.58 0.00
86_A 83_T 0.58 0.00
101_L 5_M 0.56 0.00
50_S 23_R 0.56 0.00
82_I 81_K 0.56 0.00
107_E 37_V 0.55 0.00
108_G 16_A 0.54 0.00
47_T 83_T 0.53 0.00
37_A 63_K 0.53 0.00
99_K 44_I 0.53 0.00
34_H 25_G 0.52 0.00
4_L 27_V 0.52 0.00
18_I 91_E 0.51 0.00
67_R 15_V 0.51 0.00
67_R 94_K 0.50 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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