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OPENSEQ.org
L18 - S10
UniProt: Q5SHQ4 - Q5SHN7
Length: 217
Sequences: 1013
Seq/Len: 4.85
I_Prob: 0.07
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cJ 3v2dS 3v2eJ 3v2fSContact Map
2j002j00J 2j01S 2j02J 2j03SContact Map
4juw4juwJ 4juxSContact Map
4kix4kixO 4kiyJ 4kizO 4kj0J 4kj1O 4kj2J 4kj3O 4kj4JContact Map
4kj54kj5O 4kj6J 4kj7O 4kj8J 4kj9O 4kjaJ 4kjbO 4kjcJContact Map
3knh3knhJ 3kniS 3knjJ 3knkSContact Map
3ohc3ohcJ 3ohdJ 3ohjS 3ohkSContact Map
3uz63uz6M 3uz7M 3uz8Q 3uz9QContact Map
3oge3ogeJ 3ogyJ 3oh5S 3oh7SContact Map
3uyd3uydM 3uyeQ 3uyfM 3uygQContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
32_L 56_H 1.08 0.07
95_H 53_P 0.97 0.05
86_A 61_E 0.94 0.05
75_E 28_R 0.91 0.04
112_F 93_G 0.86 0.04
93_K 38_I 0.83 0.03
65_V 27_A 0.81 0.03
49_V 29_R 0.78 0.03
42_D 51_R 0.78 0.03
30_R 86_M 0.76 0.02
48_L 11_F 0.76 0.02
79_A 38_I 0.76 0.02
47_T 99_K 0.76 0.02
61_N 50_I 0.76 0.02
54_L 50_I 0.75 0.02
34_H 66_R 0.74 0.02
107_E 66_R 0.74 0.02
97_R 27_A 0.71 0.02
62_K 49_V 0.69 0.02
54_L 100_T 0.69 0.02
92_Y 96_I 0.69 0.02
81_G 28_R 0.68 0.02
14_V 97_E 0.68 0.02
65_V 54_F 0.67 0.02
104_G 10_G 0.66 0.02
44_K 56_H 0.66 0.02
16_N 48_T 0.66 0.02
24_L 51_R 0.65 0.02
65_V 60_R 0.65 0.02
42_D 63_F 0.65 0.02
99_K 21_Q 0.64 0.01
63_T 71_L 0.64 0.01
11_K 91_P 0.64 0.01
93_K 47_F 0.64 0.01
65_V 50_I 0.64 0.01
100_A 25_E 0.63 0.01
62_K 55_K 0.62 0.01
103_E 45_R 0.62 0.01
101_L 93_G 0.61 0.01
68_Q 21_Q 0.61 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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