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OPENSEQ.org
L18 - S03
UniProt: Q5SHQ4 - P80372
Length: 351
Sequences: 1073
Seq/Len: 3.34
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cC 3v2dS 3v2eC 3v2fSContact Map
2j002j00C 2j01S 2j02C 2j03SContact Map
4juw4juwC 4juxSContact Map
4kix4kixO 4kiyC 4kizO 4kj0C 4kj1O 4kj2C 4kj3O 4kj4CContact Map
4kj54kj5O 4kj6C 4kj7O 4kj8C 4kj9O 4kjaC 4kjbO 4kjcCContact Map
3knh3knhC 3kniS 3knjC 3knkSContact Map
3ohc3ohcC 3ohdC 3ohjS 3ohkSContact Map
3uz63uz6F 3uz7F 3uz8Q 3uz9QContact Map
3oge3ogeC 3ogyC 3oh5S 3oh7SContact Map
3uyd3uydF 3uyeQ 3uyfF 3uygQContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
28_V 195_V 1.09 0.03
80_L 91_L 1.03 0.03
18_I 129_A 1.01 0.03
42_D 35_E 1.00 0.03
10_R 126_R 0.98 0.03
47_T 19_E 0.91 0.02
64_E 101_L 0.90 0.02
99_K 29_Y 0.90 0.02
81_G 142_M 0.88 0.02
23_R 103_V 0.88 0.02
103_E 212_K 0.88 0.02
78_L 41_G 0.87 0.02
103_E 90_E 0.82 0.01
30_R 88_R 0.81 0.01
56_L 173_V 0.80 0.01
104_G 64_V 0.79 0.01
57_K 71_A 0.79 0.01
29_F 165_T 0.79 0.01
45_G 91_L 0.78 0.01
60_G 162_Q 0.77 0.01
90_G 79_R 0.76 0.01
13_R 126_R 0.76 0.01
104_G 209_G 0.75 0.01
62_K 187_A 0.75 0.01
97_R 161_E 0.75 0.01
21_T 117_A 0.75 0.01
43_E 23_Y 0.74 0.01
10_R 72_K 0.73 0.01
23_R 150_K 0.73 0.01
5_T 150_K 0.72 0.01
36_Y 33_L 0.71 0.01
29_F 103_V 0.71 0.01
75_E 109_P 0.71 0.01
15_R 182_I 0.70 0.01
62_K 162_Q 0.69 0.01
16_N 94_L 0.69 0.01
104_G 212_K 0.69 0.01
105_A 76_V 0.69 0.01
67_R 92_A 0.69 0.01
29_F 18_W 0.68 0.01
108_G 21_R 0.68 0.01
100_A 69_H 0.67 0.01
37_A 146_A 0.67 0.01
30_R 203_F 0.67 0.01
47_T 129_A 0.67 0.01
82_I 117_A 0.66 0.01
29_F 75_V 0.66 0.01
8_E 153_V 0.66 0.01
42_D 129_A 0.66 0.01
112_F 137_A 0.66 0.01
57_K 31_H 0.66 0.01
108_G 121_A 0.66 0.01
101_L 24_A 0.66 0.01
28_V 89_E 0.66 0.01
48_L 210_G 0.65 0.01
112_F 23_Y 0.64 0.01
12_F 165_T 0.64 0.01
60_G 202_I 0.64 0.01
66_A 5_I 0.64 0.01
39_I 124_I 0.64 0.01
84_Q 106_V 0.64 0.01
94_Y 35_E 0.64 0.01
99_K 71_A 0.63 0.01
83_K 41_G 0.63 0.01
69_V 57_I 0.63 0.01
13_R 152_I 0.63 0.01
47_T 97_K 0.63 0.01
32_L 8_I 0.63 0.01
75_E 202_I 0.63 0.01
92_Y 10_F 0.62 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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