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OPENSEQ.org
L18 - L28
UniProt: Q5SHQ4 - P60494
Length: 210
Sequences: 1116
Seq/Len: 6.45
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dS1 3v2fS1Contact Map
2j002j01S1 2j03S1Contact Map
4juw4juxS1Contact Map
4kix4kixOX 4kizOX 4kj1OX 4kj3OXContact Map
4kj54kj5OX 4kj7OX 4kj9OX 4kjbOXContact Map
2zjr2zjrLUContact Map
4btc4btdS1Contact Map
3uyd3uyeQZ 3uygQZContact Map
4gd13r8sOX 3r8tOXContact Map
3ohc3ohjS1 3ohkS1Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
90_G 7_I 0.94 0.01
99_K 3_K 0.80 0.01
17_R 46_L 0.79 0.01
33_K 2_S 0.73 0.01
101_L 2_S 0.72 0.01
100_A 47_Q 0.69 0.01
53_S 58_I 0.68 0.01
34_H 44_P 0.67 0.01
18_I 10_K 0.65 0.01
9_R 40_R 0.62 0.01
7_Y 42_Q 0.61 0.00
8_E 73_L 0.60 0.00
95_H 36_G 0.60 0.00
59_K 59_T 0.59 0.00
44_K 64_A 0.59 0.00
81_G 46_L 0.59 0.00
82_I 10_K 0.58 0.00
56_L 56_Q 0.58 0.00
83_K 4_V 0.57 0.00
79_A 56_Q 0.57 0.00
112_F 11_R 0.56 0.00
10_R 1_M 0.56 0.00
12_F 64_A 0.56 0.00
24_L 62_V 0.56 0.00
28_V 11_R 0.56 0.00
94_Y 70_V 0.55 0.00
48_L 62_V 0.55 0.00
104_G 42_Q 0.55 0.00
100_A 36_G 0.54 0.00
62_K 68_P 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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