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OPENSEQ.org
L18 - L19
UniProt: Q5SHQ4 - P60490
Length: 258
Sequences: 1237
Seq/Len: 5.47
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dST 3v2fSTContact Map
2j002j01ST 2j03STContact Map
4juw4juxSTContact Map
4kix4kixOP 4kizOP 4kj1OP 4kj3OPContact Map
4kj54kj5OP 4kj7OP 4kj9OP 4kjbOPContact Map
2zjr2zjrLMContact Map
4btc4btdSTContact Map
3uyd3uyeQR 3uygQRContact Map
4gd13r8sOP 3r8tOPContact Map
3knh3kniST 3knkSTContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
83_K 85_K 0.90 0.01
74_A 20_P 0.87 0.01
95_H 76_F 0.77 0.00
91_P 70_V 0.76 0.00
78_L 78_L 0.74 0.00
66_A 114_L 0.72 0.00
108_G 72_V 0.72 0.00
29_F 13_R 0.71 0.00
59_K 34_V 0.69 0.00
60_G 79_H 0.68 0.00
14_V 97_A 0.67 0.00
81_G 97_A 0.66 0.00
65_V 10_V 0.66 0.00
90_G 39_R 0.66 0.00
27_S 79_H 0.66 0.00
93_K 34_V 0.66 0.00
12_F 7_I 0.65 0.00
66_A 39_R 0.65 0.00
33_K 88_I 0.64 0.00
10_R 76_F 0.64 0.00
98_V 106_S 0.63 0.00
14_V 39_R 0.62 0.00
7_Y 68_Y 0.61 0.00
34_H 53_R 0.61 0.00
66_A 45_F 0.61 0.00
20_R 70_V 0.61 0.00
13_R 29_R 0.60 0.00
9_R 80_S 0.60 0.00
107_E 88_I 0.60 0.00
9_R 104_N 0.59 0.00
17_R 19_L 0.59 0.00
90_G 52_I 0.58 0.00
22_G 86_I 0.58 0.00
19_K 83_I 0.57 0.00
50_S 84_Q 0.57 0.00
31_S 95_R 0.57 0.00
22_G 70_V 0.57 0.00
95_H 69_G 0.56 0.00
47_T 29_R 0.56 0.00
24_L 60_T 0.56 0.00
32_L 96_R 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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