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OPENSEQ.org
L18 - S07
UniProt: Q5SHQ4 - P17291
Length: 268
Sequences: 1128
Seq/Len: 4.24
I_Prob: 0.12
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cG 3v2dS 3v2eG 3v2fSContact Map
2j002j00G 2j01S 2j02G 2j03SContact Map
4juw4juwG 4juxSContact Map
4kix4kixO 4kiyG 4kizO 4kj0G 4kj1O 4kj2G 4kj3O 4kj4GContact Map
4kj54kj5O 4kj6G 4kj7O 4kj8G 4kj9O 4kjaG 4kjbO 4kjcGContact Map
3ohc3ohcG 3ohdG 3ohjS 3ohkSContact Map
3knh3knhG 3kniS 3knjG 3knkSContact Map
3uz63uz6J 3uz7J 3uz8Q 3uz9QContact Map
3oge3ogeG 3ogyG 3oh5S 3oh7SContact Map
3uyd3uydJ 3uyeQ 3uyfJ 3uygQContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
32_L 156_W 1.14 0.12
10_R 138_K 0.94 0.06
63_T 61_V 0.91 0.06
7_Y 16_L 0.89 0.05
71_R 39_A 0.89 0.05
82_I 36_K 0.83 0.04
30_R 119_R 0.80 0.04
97_R 149_R 0.79 0.04
21_T 32_R 0.78 0.04
69_V 73_M 0.77 0.03
8_E 108_A 0.76 0.03
7_Y 2_A 0.73 0.03
79_A 133_G 0.72 0.03
17_R 98_S 0.71 0.03
63_T 25_A 0.71 0.03
78_L 49_I 0.69 0.03
78_L 8_E 0.69 0.02
58_L 143_R 0.68 0.02
53_S 110_Q 0.68 0.02
35_I 124_L 0.68 0.02
78_L 59_L 0.68 0.02
68_Q 39_A 0.68 0.02
59_K 57_E 0.68 0.02
34_H 143_R 0.67 0.02
112_F 22_L 0.66 0.02
58_L 113_E 0.66 0.02
36_Y 108_A 0.66 0.02
53_S 66_V 0.65 0.02
43_E 52_E 0.65 0.02
111_E 32_R 0.65 0.02
85_V 138_K 0.65 0.02
72_A 138_K 0.64 0.02
6_A 138_K 0.64 0.02
7_Y 152_A 0.64 0.02
98_V 60_K 0.64 0.02
104_G 59_L 0.64 0.02
18_I 117_A 0.63 0.02
108_G 11_Q 0.63 0.02
56_L 25_A 0.63 0.02
8_E 12_L 0.63 0.02
107_E 135_V 0.63 0.02
112_F 94_R 0.63 0.02
82_I 83_A 0.62 0.02
93_K 154_Y 0.62 0.02
111_E 110_Q 0.62 0.02
11_K 4_R 0.62 0.02
60_G 131_K 0.62 0.02
10_R 85_Y 0.61 0.02
69_V 131_K 0.61 0.02
12_F 108_A 0.61 0.02
3_R 25_A 0.61 0.02
108_G 36_K 0.61 0.02
59_K 45_D 0.61 0.02
108_G 83_A 0.60 0.02
81_G 75_V 0.60 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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