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OPENSEQ.org
L06 - L17
UniProt: Q5SHQ3 - Q9Z9H5
Length: 298
Sequences: 1477
Seq/Len: 4.97
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dHR 3v2fHRContact Map
2j002j01HR 2j03HRContact Map
4juw4juxHRContact Map
4kix4kixGN 4kizGN 4kj1GN 4kj3GNContact Map
4kj54kj5GN 4kj7GN 4kj9GN 4kjbGNContact Map
2zjr2zjrEKContact Map
4btc4btdHRContact Map
3uyd3uyeH0 3uygH0Contact Map
4gd13r8sGN 3r8tGNContact Map
3knh3kniHR 3knkHRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
97_R 108_G 0.93 0.01
92_I 50_H 0.73 0.01
41_M 47_F 0.67 0.00
43_V 74_K 0.66 0.00
85_K 95_T 0.64 0.00
139_Q 38_V 0.63 0.00
133_V 59_D 0.61 0.00
171_L 73_V 0.60 0.00
67_L 67_L 0.60 0.00
52_V 95_T 0.58 0.00
9_I 76_V 0.58 0.00
177_G 32_G 0.58 0.00
92_I 86_R 0.57 0.00
147_N 91_Q 0.56 0.00
162_I 95_T 0.55 0.00
63_S 49_D 0.54 0.00
150_A 74_K 0.54 0.00
75_A 22_R 0.54 0.00
43_V 51_L 0.54 0.00
19_V 25_A 0.53 0.00
174_G 100_L 0.53 0.00
70_T 42_K 0.53 0.00
147_N 44_L 0.53 0.00
137_D 40_K 0.53 0.00
150_A 32_G 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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