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OPENSEQ.org
L06 - L25
UniProt: Q5SHQ3 - Q5SHZ1
Length: 386
Sequences: 1251
Seq/Len: 3.46
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dHZ 3v2fHZContact Map
2j002j01HZ 2j03HZContact Map
4juw4juxHZContact Map
4kix4kixGV 4kizGV 4kj1GV 4kj3GVContact Map
4kj54kj5GV 4kj7GV 4kj9GV 4kjbGVContact Map
2zjr2zjrESContact Map
4btc4btdHZContact Map
3uyd3uyeHV 3uygHVContact Map
4gd13r8sGV 3r8tGVContact Map
3ohc3ohjHZ 3ohkHZContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
176_A 158_P 0.85 0.00
49_V 100_V 0.83 0.00
42_R 155_L 0.80 0.00
50_V 38_Y 0.80 0.00
125_V 69_T 0.79 0.00
119_E 105_V 0.78 0.00
48_G 171_I 0.74 0.00
49_V 171_I 0.71 0.00
177_G 81_R 0.70 0.00
63_S 15_P 0.69 0.00
117_P 94_E 0.69 0.00
44_V 124_I 0.69 0.00
130_R 57_I 0.68 0.00
109_F 155_L 0.68 0.00
88_L 174_V 0.68 0.00
96_A 131_R 0.67 0.00
62_K 74_V 0.66 0.00
162_I 18_L 0.66 0.00
44_V 148_D 0.65 0.00
63_S 84_E 0.65 0.00
11_V 62_P 0.65 0.00
155_S 79_R 0.65 0.00
99_V 72_R 0.63 0.00
176_A 90_V 0.63 0.00
128_P 95_P 0.63 0.00
169_V 77_D 0.63 0.00
38_S 44_F 0.62 0.00
173_P 107_T 0.61 0.00
163_Y 33_L 0.61 0.00
99_V 32_H 0.60 0.00
60_R 91_L 0.60 0.00
174_G 53_I 0.60 0.00
9_I 173_A 0.60 0.00
162_I 82_R 0.60 0.00
95_R 58_V 0.60 0.00
86_E 91_L 0.60 0.00
12_P 143_G 0.60 0.00
144_V 171_I 0.59 0.00
50_V 61_L 0.59 0.00
50_V 164_A 0.59 0.00
148_I 73_Q 0.59 0.00
83_Y 17_A 0.59 0.00
84_S 107_T 0.58 0.00
166_G 150_L 0.58 0.00
76_V 105_V 0.58 0.00
64_L 7_A 0.58 0.00
83_Y 151_H 0.58 0.00
121_I 100_V 0.58 0.00
113_V 150_L 0.58 0.00
130_R 26_G 0.58 0.00
162_I 169_E 0.58 0.00
89_I 15_P 0.58 0.00
166_G 33_L 0.57 0.00
80_S 72_R 0.57 0.00
72_I 33_L 0.57 0.00
148_I 148_D 0.57 0.00
107_V 15_P 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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