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OPENSEQ.org
L06 - L36
UniProt: Q5SHQ3 - Q5SHR2
Length: 217
Sequences: 989
Seq/Len: 4.58
I_Prob: 0.94
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dH9 3v2fH9Contact Map
2j002j01H9 2j03H9Contact Map
4juw4juxH9Contact Map
4kix4kixG4 4kizG4 4kj1G4 4kj3G4Contact Map
4kj54kj5G4 4kj7G4 4kj9G4 4kjbG4Contact Map
2zjr2zjrE4Contact Map
4btc4btdH9Contact Map
4gd13r8sG4 3r8tG4Contact Map
3knh3kniH9 3knkH9Contact Map
3v223v23H9 3v25H9Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
170_R 30_P 1.68 0.94
102_A 18_R 0.82 0.28
63_S 15_K 0.82 0.27
174_G 29_N 0.71 0.17
106_T 31_K 0.70 0.17
137_D 21_G 0.69 0.16
7_L 31_K 0.68 0.15
35_V 31_K 0.68 0.15
57_D 35_R 0.65 0.13
123_F 20_H 0.64 0.12
20_A 5_A 0.64 0.12
32_E 23_V 0.63 0.12
150_A 31_K 0.63 0.12
126_P 24_Y 0.59 0.09
59_R 9_R 0.58 0.09
42_R 35_R 0.57 0.09
139_Q 16_V 0.57 0.09
166_G 18_R 0.57 0.08
88_L 18_R 0.57 0.08
62_K 35_R 0.57 0.08
32_E 35_R 0.57 0.08
168_P 28_E 0.57 0.08
87_L 7_V 0.56 0.08
177_G 12_D 0.55 0.08
6_R 22_R 0.55 0.08
144_V 28_E 0.55 0.07
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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