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OPENSEQ.org
L06 - S14
UniProt: Q5SHQ3 - Q5SHQ1
Length: 241
Sequences: 1363
Seq/Len: 5.68
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cN 3v2dH 3v2eN 3v2fHContact Map
2j002j00N 2j01H 2j02N 2j03HContact Map
4juw4juwN 4juxHContact Map
4kix4kixG 4kiyN 4kizG 4kj0N 4kj1G 4kj2N 4kj3G 4kj4NContact Map
4kj54kj5G 4kj6N 4kj7G 4kj8N 4kj9G 4kjaN 4kjbG 4kjcNContact Map
3ohc3ohcN 3ohdN 3ohjH 3ohkHContact Map
3knh3knhN 3kniH 3knjN 3knkHContact Map
3uz63uz6Q 3uz7Q 3uz8H 3uz9HContact Map
3u5b3u5cd 3u5eH 3u5gd 3u5iHContact Map
3oge3ogeN 3ogyN 3oh5H 3oh7HContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
143_Q 16_F 0.83 0.00
88_L 42_I 0.67 0.00
173_P 38_G 0.64 0.00
165_A 59_A 0.64 0.00
5_G 47_L 0.63 0.00
29_P 31_R 0.63 0.00
126_P 59_A 0.62 0.00
176_A 7_I 0.62 0.00
5_G 49_H 0.61 0.00
19_V 56_V 0.59 0.00
151_I 18_V 0.59 0.00
67_L 33_V 0.58 0.00
125_V 40_C 0.57 0.00
169_V 35_R 0.57 0.00
177_G 49_H 0.56 0.00
174_G 49_H 0.54 0.00
25_K 18_V 0.54 0.00
150_A 37_F 0.54 0.00
109_F 34_Y 0.54 0.00
169_V 10_A 0.53 0.00
61_H 33_V 0.53 0.00
17_V 50_K 0.52 0.00
176_A 36_F 0.52 0.00
87_L 59_A 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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