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OPENSEQ.org
L06 - S17
UniProt: Q5SHQ3 - Q5SHP7
Length: 285
Sequences: 1700
Seq/Len: 6.54
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cQ 3v2dH 3v2eQ 3v2fHContact Map
2j002j00Q 2j01H 2j02Q 2j03HContact Map
4juw4juwQ 4juxHContact Map
4kix4kixG 4kiyQ 4kizG 4kj0Q 4kj1G 4kj2Q 4kj3G 4kj4QContact Map
4kj54kj5G 4kj6Q 4kj7G 4kj8Q 4kj9G 4kjaQ 4kjbG 4kjcQContact Map
3ohc3ohcQ 3ohdQ 3ohjH 3ohkHContact Map
3knh3knhQ 3kniH 3knjQ 3knkHContact Map
3uz63uz6T 3uz7T 3uz8H 3uz9HContact Map
3oge3ogeQ 3ogyQ 3oh5H 3oh7HContact Map
3uyd3uydT 3uyeH 3uyfT 3uygHContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
13_K 65_I 0.73 0.00
163_Y 33_G 0.73 0.00
59_R 9_V 0.68 0.00
178_A 25_R 0.66 0.00
63_S 68_R 0.63 0.00
173_P 37_K 0.62 0.00
165_A 38_R 0.62 0.00
66_G 4_K 0.59 0.00
83_Y 29_H 0.58 0.00
67_L 6_L 0.58 0.00
38_S 26_Q 0.56 0.00
104_E 3_K 0.56 0.00
95_R 15_M 0.56 0.00
174_G 40_K 0.56 0.00
133_V 57_V 0.56 0.00
130_R 31_L 0.55 0.00
177_G 43_L 0.55 0.00
55_P 62_S 0.54 0.00
33_L 14_K 0.54 0.00
133_V 61_E 0.54 0.00
67_L 35_V 0.54 0.00
39_P 35_V 0.53 0.00
123_F 56_V 0.53 0.00
111_H 23_V 0.53 0.00
75_A 15_M 0.53 0.00
131_V 77_V 0.53 0.00
92_I 7_T 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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