OPENSEQ.org
L06 - S09
UniProt: Q5SHQ3 - P80374
Length: 308
Sequences: 1710
Seq/Len: 5.64
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cI 3v2dH 3v2eI 3v2fHContact Map
2j002j00I 2j01H 2j02I 2j03HContact Map
4juw4juwI 4juxHContact Map
4kix4kixG 4kiyI 4kizG 4kj0I 4kj1G 4kj2I 4kj3G 4kj4IContact Map
4kj54kj5G 4kj6I 4kj7G 4kj8I 4kj9G 4kjaI 4kjbG 4kjcIContact Map
3ohc3ohcI 3ohdI 3ohjH 3ohkHContact Map
3knh3knhI 3kniH 3knjI 3knkHContact Map
3uz63uz6L 3uz7L 3uz8H 3uz9HContact Map
3u5b3u5cQ 3u5eH 3u5gQ 3u5iHContact Map
3oge3ogeI 3ogyI 3oh5H 3oh7HContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
92_I 48_E 0.79 0.00
150_A 61_A 0.79 0.00
176_A 70_K 0.76 0.00
143_Q 109_V 0.75 0.00
59_R 35_E 0.74 0.00
4_I 23_N 0.70 0.00
169_V 121_R 0.70 0.00
127_E 9_R 0.70 0.00
115_V 27_T 0.69 0.00
117_P 117_H 0.69 0.00
174_G 97_K 0.69 0.00
131_V 51_R 0.68 0.00
144_V 118_K 0.67 0.00
169_V 36_Y 0.65 0.00
166_G 74_I 0.65 0.00
173_P 40_L 0.65 0.00
81_E 98_P 0.64 0.00
4_I 32_D 0.63 0.00
36_P 27_T 0.61 0.00
37_V 53_V 0.60 0.00
44_V 95_K 0.59 0.00
139_Q 9_R 0.59 0.00
128_P 98_P 0.59 0.00
152_R 48_E 0.59 0.00
72_I 37_F 0.59 0.00
107_V 75_D 0.58 0.00
168_P 46_A 0.58 0.00
116_E 32_D 0.58 0.00
178_A 123_P 0.58 0.00
90_K 79_L 0.57 0.00
94_Y 117_H 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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