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OPENSEQ.org
L06 - S04
UniProt: Q5SHQ3 - P80373
Length: 389
Sequences: 1338
Seq/Len: 3.46
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cD 3v2dH 3v2eD 3v2fHContact Map
2j002j00D 2j01H 2j02D 2j03HContact Map
4juw4juwD 4juxHContact Map
4kix4kixG 4kiyD 4kizG 4kj0D 4kj1G 4kj2D 4kj3G 4kj4DContact Map
4kj54kj5G 4kj6D 4kj7G 4kj8D 4kj9G 4kjaD 4kjbG 4kjcDContact Map
3knh3knhD 3kniH 3knjD 3knkHContact Map
3ohc3ohcD 3ohdD 3ohjH 3ohkHContact Map
3uz63uz6G 3uz7G 3uz8H 3uz9HContact Map
3u5b3u5cEJ 3u5eH 3u5gEJ 3u5iHContact Map
3oge3ogeD 3ogyD 3oh5H 3oh7HContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
121_I 181_M 0.85 0.00
92_I 52_S 0.80 0.00
117_P 203_V 0.77 0.00
44_V 7_P 0.76 0.00
50_V 81_E 0.68 0.00
92_I 63_K 0.67 0.00
29_P 146_I 0.66 0.00
32_E 110_F 0.66 0.00
18_E 179_E 0.66 0.00
106_T 56_V 0.65 0.00
92_I 5_I 0.65 0.00
146_A 180_G 0.65 0.00
29_P 177_D 0.65 0.00
73_A 110_F 0.64 0.00
83_Y 122_R 0.62 0.00
146_A 173_W 0.62 0.00
121_I 192_E 0.62 0.00
68_T 111_A 0.61 0.00
140_K 133_V 0.61 0.00
35_V 187_R 0.60 0.00
56_S 10_R 0.60 0.00
171_L 50_R 0.60 0.00
68_T 65_R 0.60 0.00
166_G 154_N 0.59 0.00
17_V 146_I 0.59 0.00
39_P 159_R 0.58 0.00
74_N 93_F 0.58 0.00
174_G 125_H 0.58 0.00
147_N 55_A 0.58 0.00
124_E 142_P 0.58 0.00
171_L 92_V 0.57 0.00
176_A 134_D 0.57 0.00
121_I 201_Q 0.56 0.00
39_P 73_R 0.56 0.00
170_R 2_G 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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