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OPENSEQ.org
L06 - L32
UniProt: Q5SHQ3 - P80339
Length: 240
Sequences: 1063
Seq/Len: 4.50
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dH5 3v2fH5Contact Map
2j002j01H5 2j03H5Contact Map
4juw4juxH5Contact Map
4kix4kixG0 4kizG0 4kj1G0 4kj3G0Contact Map
4kj54kj5G0 4kj7G0 4kj9G0 4kjbG0Contact Map
2zjr2zjrEZContact Map
4btc4btdH5Contact Map
3uyd3uyeH5 3uygH5Contact Map
4gd13r8sG0 3r8tG0Contact Map
3knh3kniH5 3knkH5Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
143_Q 55_R 0.83 0.00
131_V 54_G 0.81 0.00
13_K 12_S 0.81 0.00
171_L 19_R 0.77 0.00
81_E 10_K 0.74 0.00
54_R 13_K 0.73 0.00
10_P 55_R 0.73 0.00
5_G 9_K 0.71 0.00
67_L 37_K 0.69 0.00
141_V 10_K 0.68 0.00
52_V 53_A 0.66 0.00
92_I 57_V 0.64 0.00
18_E 59_E 0.64 0.00
174_G 19_R 0.64 0.00
121_I 39_M 0.63 0.00
134_S 57_V 0.61 0.00
81_E 58_L 0.61 0.00
162_I 39_M 0.60 0.00
44_V 45_V 0.60 0.00
139_Q 27_P 0.59 0.00
118_P 14_A 0.59 0.00
109_F 54_G 0.59 0.00
90_K 8_K 0.58 0.00
81_E 59_E 0.57 0.00
81_E 28_P 0.57 0.00
63_S 6_V 0.56 0.00
170_R 13_K 0.56 0.00
131_V 45_V 0.56 0.00
33_L 28_P 0.55 0.00
133_V 22_H 0.55 0.00
96_A 25_L 0.55 0.00
53_E 14_A 0.55 0.00
174_G 49_C 0.54 0.00
96_A 21_S 0.54 0.00
119_E 45_V 0.54 0.00
25_K 26_T 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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