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OPENSEQ.org
L06 - L20
UniProt: Q5SHQ3 - P60491
Length: 298
Sequences: 1399
Seq/Len: 4.73
I_Prob: 0.07
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dHU 3v2fHUContact Map
2j002j01HU 2j03HUContact Map
4juw4juxHUContact Map
4kix4kixGQ 4kizGQ 4kj1GQ 4kj3GQContact Map
4kj54kj5GQ 4kj7GQ 4kj9GQ 4kjbGQContact Map
2zjr2zjrENContact Map
4btc4btdHUContact Map
3uyd3uyeH1 3uygH1Contact Map
4gd13r8sGQ 3r8tGQContact Map
3ohc3ohjHU 3ohkHUContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
92_I 93_K 1.09 0.07
65_H 14_H 0.85 0.03
147_N 36_R 0.78 0.03
170_R 73_G 0.70 0.02
81_E 115_A 0.69 0.02
67_L 29_S 0.68 0.02
178_A 38_T 0.68 0.02
65_H 91_D 0.67 0.02
85_K 79_F 0.67 0.02
143_Q 39_L 0.66 0.02
131_V 83_L 0.65 0.02
43_V 107_A 0.62 0.01
177_G 14_H 0.62 0.01
52_V 88_I 0.61 0.01
59_R 91_D 0.61 0.01
107_V 7_G 0.60 0.01
11_V 108_E 0.60 0.01
137_D 115_A 0.59 0.01
70_T 77_S 0.59 0.01
112_P 69_C 0.58 0.01
59_R 90_V 0.57 0.01
110_S 13_K 0.57 0.01
32_E 72_H 0.57 0.01
62_K 52_R 0.56 0.01
95_R 116_A 0.56 0.01
122_T 101_R 0.56 0.01
90_K 53_R 0.56 0.01
178_A 9_V 0.55 0.01
132_R 100_V 0.55 0.01
151_I 42_A 0.54 0.01
177_G 25_W 0.54 0.01
89_I 34_K 0.54 0.01
121_I 111_E 0.53 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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