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OPENSEQ.org
L06 - L19
UniProt: Q5SHQ3 - P60490
Length: 326
Sequences: 1361
Seq/Len: 4.61
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dHT 3v2fHTContact Map
2j002j01HT 2j03HTContact Map
4juw4juxHTContact Map
4kix4kixGP 4kizGP 4kj1GP 4kj3GPContact Map
4kj54kj5GP 4kj7GP 4kj9GP 4kjbGPContact Map
2zjr2zjrEMContact Map
4btc4btdHTContact Map
3uyd3uyeHR 3uygHRContact Map
4gd13r8sGP 3r8tGPContact Map
3ohc3ohjHT 3ohkHTContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
146_A 89_V 0.74 0.00
153_K 58_N 0.74 0.00
106_T 93_R 0.73 0.00
33_L 49_V 0.71 0.00
17_V 40_T 0.70 0.00
24_V 66_V 0.69 0.00
121_I 6_L 0.68 0.00
74_N 39_R 0.64 0.00
104_E 65_K 0.64 0.00
89_I 34_V 0.62 0.00
37_V 115_R 0.62 0.00
125_V 29_R 0.60 0.00
9_I 21_E 0.59 0.00
32_E 28_V 0.59 0.00
33_L 81_P 0.57 0.00
112_P 45_F 0.57 0.00
83_Y 83_I 0.56 0.00
139_Q 7_I 0.56 0.00
16_S 85_K 0.56 0.00
20_A 86_I 0.56 0.00
60_R 70_V 0.56 0.00
110_S 110_I 0.56 0.00
4_I 61_F 0.56 0.00
12_P 100_Y 0.55 0.00
44_V 44_D 0.55 0.00
51_R 21_E 0.54 0.00
90_K 17_T 0.54 0.00
83_Y 12_S 0.54 0.00
54_R 31_S 0.54 0.00
68_T 60_T 0.54 0.00
84_S 87_D 0.54 0.00
67_L 65_K 0.53 0.00
92_I 14_Y 0.53 0.00
29_P 35_K 0.52 0.00
134_S 13_R 0.52 0.00
163_Y 76_F 0.52 0.00
110_S 65_K 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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