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OPENSEQ.org
S08 - S14
UniProt: Q5SHQ2 - Q5SHQ1
Length: 199
Sequences: 1276
Seq/Len: 6.65
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeHNContact Map
3v2c3v2cHN 3v2eHNContact Map
2uub2uubHNContact Map
2j002j00HN 2j02HNContact Map
3t1y3t1yHNContact Map
4juw4juwHNContact Map
2uua2uuaHNContact Map
4b3m4b3mHNContact Map
2uxc2uxcHNContact Map
4kix4kiyHN 4kj0HN 4kj2HN 4kj4HNContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
135_C 27_C 0.93 0.01
46_K 47_L 0.79 0.01
107_L 46_E 0.79 0.01
59_L 14_P 0.77 0.01
32_K 36_F 0.73 0.01
135_C 24_C 0.72 0.01
91_R 46_E 0.67 0.01
136_E 59_A 0.66 0.01
126_K 59_A 0.65 0.01
112_L 49_H 0.65 0.01
18_R 39_L 0.64 0.01
19_V 36_F 0.64 0.01
104_R 52_Q 0.62 0.00
113_S 42_I 0.59 0.00
44_F 27_C 0.59 0.00
138_W 59_A 0.59 0.00
134_I 21_Y 0.57 0.00
53_V 39_L 0.57 0.00
134_I 57_R 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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