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OPENSEQ.org
S08 - S17
UniProt: Q5SHQ2 - Q5SHP7
Length: 243
Sequences: 1463
Seq/Len: 6.93
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeHQContact Map
3v2c3v2cHQ 3v2eHQContact Map
2uub2uubHQContact Map
2j002j00HQ 2j02HQContact Map
3t1y3t1yHQContact Map
4juw4juwHQContact Map
2uua2uuaHQContact Map
4b3m4b3mHQContact Map
2uxc2uxcHQContact Map
4kix4kiyHQ 4kj0HQ 4kj2HQ 4kj4HQContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
135_C 62_S 0.90 0.01
116_K 67_K 0.87 0.01
78_Q 35_V 0.85 0.01
27_P 12_S 0.81 0.01
134_I 35_V 0.78 0.01
100_I 32_Y 0.76 0.01
82_H 31_L 0.75 0.01
105_R 6_L 0.74 0.01
99_E 58_E 0.72 0.00
135_C 51_Y 0.71 0.00
16_A 26_Q 0.71 0.00
129_V 61_E 0.68 0.00
44_F 80_G 0.68 0.00
93_V 43_L 0.67 0.00
76_P 6_L 0.67 0.00
104_R 60_I 0.66 0.00
102_R 26_Q 0.65 0.00
109_I 20_T 0.65 0.00
124_A 75_R 0.64 0.00
138_W 77_V 0.62 0.00
21_K 43_L 0.62 0.00
2_L 33_G 0.62 0.00
112_L 56_V 0.62 0.00
82_H 72_R 0.61 0.00
14_R 46_D 0.61 0.00
102_R 42_Y 0.61 0.00
126_K 67_K 0.60 0.00
79_V 36_I 0.60 0.00
3_T 72_R 0.60 0.00
57_P 67_K 0.60 0.00
99_E 65_I 0.59 0.00
135_C 53_L 0.59 0.00
28_A 34_K 0.58 0.00
33_E 23_V 0.58 0.00
120_T 15_M 0.58 0.00
32_K 1_M 0.58 0.00
136_E 68_R 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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