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OPENSEQ.org
S08 - S10
UniProt: Q5SHQ2 - Q5SHN7
Length: 243
Sequences: 1143
Seq/Len: 4.97
I_Prob: 0.47
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeHJContact Map
3v2c3v2cHJ 3v2eHJContact Map
2uub2uubHJContact Map
2j002j00HJ 2j02HJContact Map
3t1y3t1yHJContact Map
4juw4juwHJContact Map
2uua2uuaHJContact Map
4b3m4b3mHJContact Map
2uxc2uxcHJContact Map
4kix4kiyHJ 4kj0HJ 4kj2HJ 4kj4HJContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
119_L 94_V 1.29 0.47
120_T 16_L 1.18 0.37
59_L 48_T 1.06 0.27
100_I 53_P 1.00 0.22
3_T 10_G 0.95 0.19
2_L 83_E 0.90 0.16
3_T 99_K 0.89 0.15
134_I 46_R 0.88 0.15
128_G 58_D 0.88 0.15
134_I 30_S 0.87 0.14
136_E 44_V 0.86 0.14
135_C 19_S 0.86 0.14
112_L 56_H 0.85 0.13
96_G 24_V 0.84 0.13
138_W 16_L 0.83 0.12
99_E 18_A 0.82 0.12
20_Y 65_L 0.81 0.11
25_D 50_I 0.80 0.11
138_W 42_T 0.78 0.10
51_V 38_I 0.78 0.10
129_V 96_I 0.78 0.10
82_H 65_L 0.78 0.10
26_V 50_I 0.77 0.10
96_G 43_R 0.77 0.09
78_Q 55_K 0.76 0.09
97_V 33_Q 0.76 0.09
52_D 53_P 0.75 0.09
135_C 65_L 0.75 0.09
66_G 61_E 0.75 0.09
50_R 16_L 0.75 0.09
2_L 2_P 0.74 0.09
6_I 10_G 0.74 0.08
21_K 61_E 0.73 0.08
118_V 18_A 0.73 0.08
126_K 40_L 0.73 0.08
134_I 72_V 0.72 0.08
20_Y 45_R 0.72 0.08
97_V 80_K 0.71 0.07
17_T 91_P 0.71 0.07
16_A 3_K 0.71 0.07
51_V 35_S 0.70 0.07
36_L 79_R 0.69 0.07
105_R 87_T 0.69 0.07
100_I 20_A 0.69 0.07
133_L 58_D 0.68 0.07
52_D 65_L 0.68 0.07
82_H 91_P 0.68 0.07
34_E 34_V 0.68 0.07
40_A 52_G 0.68 0.06
93_V 59_S 0.68 0.06
9_M 53_P 0.68 0.06
136_E 100_T 0.67 0.06
111_I 40_L 0.67 0.06
79_V 50_I 0.67 0.06
39_L 10_G 0.67 0.06
87_S 93_G 0.66 0.06
25_D 21_Q 0.66 0.06
118_V 95_E 0.66 0.06
76_P 87_T 0.65 0.06
98_K 43_R 0.65 0.06
24_T 69_N 0.65 0.06
95_V 33_Q 0.65 0.06
123_E 55_K 0.65 0.06
135_C 11_F 0.65 0.06
9_M 52_G 0.65 0.06
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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