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OPENSEQ.org
S08 - S12
UniProt: Q5SHQ2 - Q5SHN3
Length: 270
Sequences: 1178
Seq/Len: 4.60
I_Prob: 0.91
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeHLContact Map
3v2c3v2cHL 3v2eHLContact Map
2uub2uubHLContact Map
2j002j00HL 2j02HLContact Map
3t1y3t1yHLContact Map
4juw4juwHLContact Map
2uua2uuaHLContact Map
4b3m4b3mHLContact Map
2uxc2uxcHLContact Map
4kix4kiyHL 4kj0HL 4kj2HL 4kj4HLContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
3_T 53_A 1.61 0.91
79_V 5_N 1.37 0.80
42_E 79_V 1.14 0.61
109_I 58_T 1.12 0.59
129_V 113_S 0.99 0.44
115_S 105_A 0.97 0.42
80_I 63_V 0.95 0.40
45_I 119_T 0.94 0.39
120_T 81_L 0.93 0.37
20_Y 26_G 0.92 0.36
93_V 82_I 0.91 0.35
31_F 98_V 0.90 0.34
115_S 65_A 0.88 0.32
88_K 15_V 0.88 0.32
105_R 109_D 0.82 0.26
79_V 79_V 0.81 0.25
9_M 60_G 0.81 0.25
134_I 112_K 0.80 0.24
13_I 17_K 0.80 0.24
116_K 82_I 0.80 0.23
57_P 81_L 0.78 0.22
76_P 25_K 0.78 0.22
115_S 24_L 0.78 0.21
26_V 98_V 0.77 0.21
104_R 65_A 0.77 0.21
67_P 109_D 0.77 0.21
40_A 36_V 0.76 0.20
134_I 104_A 0.76 0.20
46_K 70_E 0.76 0.20
58_Y 16_R 0.75 0.20
96_G 70_E 0.75 0.20
123_E 82_I 0.75 0.19
105_R 20_K 0.74 0.18
100_I 21_V 0.73 0.18
52_D 40_V 0.73 0.18
127_L 121_K 0.73 0.18
116_K 36_V 0.73 0.18
118_V 73_N 0.72 0.17
98_K 17_K 0.72 0.17
103_V 119_T 0.72 0.17
135_C 14_K 0.72 0.17
52_D 104_A 0.71 0.17
135_C 52_V 0.71 0.16
44_F 113_S 0.71 0.16
107_L 8_V 0.70 0.16
21_K 54_K 0.70 0.16
82_H 113_S 0.70 0.15
34_E 65_A 0.69 0.15
104_R 8_V 0.69 0.15
130_G 62_E 0.68 0.14
27_P 94_R 0.67 0.14
16_A 30_R 0.67 0.13
30_R 35_T 0.67 0.13
128_G 113_S 0.67 0.13
65_Y 33_V 0.66 0.13
78_Q 116_K 0.66 0.13
20_Y 21_V 0.66 0.13
99_E 26_G 0.66 0.12
136_E 4_I 0.65 0.12
41_R 63_V 0.65 0.12
93_V 79_V 0.64 0.12
112_L 81_L 0.64 0.12
13_I 5_N 0.64 0.12
112_L 14_K 0.64 0.12
138_W 21_V 0.64 0.12
135_C 15_V 0.64 0.12
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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