OPENSEQ.org
S08 - S20
UniProt: Q5SHQ2 - P80380
Length: 244
Sequences: 1225
Seq/Len: 5.64
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeHTContact Map
3v2c3v2cHT 3v2eHTContact Map
2uub2uubHTContact Map
2j002j00HT 2j02HTContact Map
3t1y3t1yHTContact Map
4juw4juwHTContact Map
2uua2uuaHTContact Map
4b3m4b3mHTContact Map
2uxc2uxcHTContact Map
4kix4kiyHT 4kj0HT 4kj2HT 4kj4HTContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
96_G 19_S 0.96 0.01
7_A 31_S 0.86 0.01
61_V 83_R 0.85 0.01
33_E 38_K 0.81 0.01
135_C 12_A 0.73 0.01
91_R 32_A 0.71 0.01
44_F 52_A 0.70 0.01
133_L 59_A 0.69 0.01
137_V 29_K 0.69 0.01
86_I 55_I 0.69 0.01
44_F 78_A 0.68 0.01
86_I 49_A 0.67 0.01
45_I 51_E 0.66 0.01
26_V 61_S 0.66 0.01
105_R 23_R 0.66 0.01
3_T 32_A 0.66 0.01
16_A 39_K 0.65 0.01
109_I 16_H 0.65 0.01
61_V 52_A 0.64 0.01
110_A 37_S 0.64 0.01
9_M 61_S 0.64 0.01
83_I 88_V 0.64 0.01
88_K 32_A 0.64 0.01
21_K 13_L 0.63 0.01
13_I 37_S 0.63 0.01
104_R 10_L 0.62 0.01
49_E 59_A 0.62 0.01
98_K 78_A 0.61 0.01
19_V 70_S 0.61 0.01
79_V 37_S 0.60 0.01
135_C 44_A 0.60 0.01
31_F 33_I 0.60 0.01
123_E 36_L 0.59 0.01
93_V 13_L 0.59 0.01
2_L 52_A 0.59 0.01
40_A 82_S 0.59 0.01
39_L 90_Q 0.59 0.01
44_F 43_L 0.59 0.01
13_I 84_L 0.58 0.01
30_R 92_L 0.58 0.01
45_I 17_R 0.58 0.01
11_T 53_L 0.58 0.01
31_F 54_K 0.58 0.01
44_F 8_R 0.58 0.01
100_I 23_R 0.58 0.01
52_D 57_R 0.57 0.01
91_R 9_N 0.57 0.01
76_P 47_G 0.57 0.01
115_S 41_I 0.57 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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