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OPENSEQ.org
S14 - S16
UniProt: Q5SHQ1 - Q5SJH3
Length: 149
Sequences: 1173
Seq/Len: 8.03
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeNPContact Map
3v2c3v2cNP 3v2eNPContact Map
2uub2uubNPContact Map
2j002j00NP 2j02NPContact Map
3t1y3t1yNPContact Map
4juw4juwNPContact Map
2uua2uuaNPContact Map
4b3m4b3mNPContact Map
2uxc2uxcNPContact Map
4kix4kiyNP 4kj0NP 4kj2NP 4kj4NPContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
53_L 32_Y 0.83 0.00
31_R 39_Y 0.78 0.00
40_C 53_V 0.73 0.00
48_A 67_T 0.71 0.00
33_V 66_P 0.68 0.00
4_K 42_R 0.66 0.00
40_C 56_A 0.65 0.00
20_A 51_V 0.64 0.00
37_F 71_R 0.63 0.00
31_R 69_T 0.63 0.00
31_R 13_H 0.60 0.00
52_Q 11_S 0.59 0.00
46_E 19_I 0.59 0.00
57_R 31_K 0.58 0.00
10_A 60_L 0.58 0.00
26_R 54_E 0.57 0.00
53_L 18_R 0.57 0.00
49_H 13_H 0.57 0.00
44_L 72_R 0.57 0.00
38_G 45_T 0.55 0.00
39_L 86_E 0.54 0.00
26_R 66_P 0.54 0.00
49_H 1_M 0.53 0.00
31_R 18_R 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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